TCONS_00042757-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00042757-protein
Unique NameTCONS_00042757-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length173

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00042757-protein ID=TCONS_00042757-protein|Name=TCONS_00042757-protein|organism=Clytia hemisphaerica|type=polypeptide|length=173bp
MEPLISKGQQRWLMLASCLVGNLLTTFFFNLGKLCIEVVPTSKVAFLSEH
LCIGCGICVKKCPFEAITIINLPSNLETQTTHRYSANSFKLHRLPTPRPG
EVLGLVGTNGIGKSTALKILAGKLKPNLGRFSNAPDWQEILTYFRGSELQ
NYFTKVLEDDLKVSFKHKKSCIN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_026558XLOC_026558Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00042757TCONS_00042757Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013283RLI1
IPR0178964Fe4S_Fe-S-bd
IPR003439ABC_transporter-like
IPR0179004Fe4S_Fe_S_CS
Vocabulary: Molecular Function
TermDefinition
GO:0016887ATPase activity
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016887 ATPase activity
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013283RLI1PRINTSPR01868ABCEFAMILYcoord: 49..73
score: 78.88
coord: 137..153
score: 68.47
coord: 153..173
score: 21.78
coord: 104..129
score: 79.08
coord: 76..96
score: 60.95
NoneNo IPR availableGENE3D3.30.70.20coord: 61..105
e-value: 5.0E-5
score: 22.9
NoneNo IPR availableGENE3D3.30.70.20coord: 17..60
e-value: 5.5E-7
score: 28.7
NoneNo IPR availableGENE3D3.40.50.300coord: 106..167
e-value: 3.5E-10
score: 39.4
NoneNo IPR availableSUPERFAMILY548624Fe-4S ferredoxinscoord: 35..153
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainPFAMPF00037Fer4coord: 49..68
e-value: 3.1E-8
score: 33.0
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainPROSITEPS513794FE4S_FER_2coord: 43..72
score: 10.255
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 98..139
e-value: 1.1E-7
score: 32.4
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved sitePROSITEPS001984FE4S_FER_1coord: 52..63

Blast
[Close]
BLAST of TCONS_00042757-protein vs. Swiss-Prot (Human)
Match: ABCE1 (ATP-binding cassette sub-family E member 1 OS=Homo sapiens GN=ABCE1 PE=1 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 2.228e-77
Identity = 109/136 (80.15%), Postives = 123/136 (90.44%), Query Frame = 0 
Query:   31 LGKLCIEVVPTSKVAFLSEHLCIGCGICVKKCPFEAITIINLPSNLETQTTHRYSANSFKLHRLPTPRPGEVLGLVGTNGIGKSTALKILAGKLKPNLGRFSNAPDWQEILTYFRGSELQNYFTKVLEDDLKVSFK 166
            +GKLCIEV P SK+A++SE LCIGCGIC+KKCPF A++I+NLPSNLE +TTHRY AN+FKLHRLP PRPGEVLGLVGTNGIGKSTALKILAGK KPNLG++ + PDWQEILTYFRGSELQNYFTK+LEDDLK   K
Sbjct:   34 MGKLCIEVTPQSKIAWISETLCIGCGICIKKCPFGALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRPGEVLGLVGTNGIGKSTALKILAGKQKPNLGKYDDPPDWQEILTYFRGSELQNYFTKILEDDLKAIIK 169
The following BLAST results are available for this feature:
BLAST of TCONS_00042757-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ABCE12.228e-7780.15ATP-binding cassette sub-family E member 1 OS=Homo... [more]
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