|
|
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00042553-protein ID=TCONS_00042553-protein|Name=TCONS_00042553-protein|organism=Clytia hemisphaerica|type=polypeptide|length=601bp
NSGLTHHGEAIGEEEELTPTLENFIVLQWLHLLHKDLPTLVKQRYGTELR
SRTLASIKPEISQAMDSLLESIQSNDEAKVLRSASSFHRSKQPSSSTRRP
SSIKASCPLCSSMNRPSNHFLSKCQFLPDQDRRFMAKARLIAALDENDQP
EIDLQSAEDLPSQVAAISLPSSTRRVQIKSSPVVNMTYKQYDISTTLDTG
SETNMISESTARLIHAPITPSSQSAVQADGQSELSVIGETRINLTFHNKT
FSLEALVVKNLDGDVIAGYNGASGPIKAIVNMGPVEPPQRKGKVPQYSND
KLHELQAKCDELERLQVLRKPEDLGITPEYLNPSFLVKKPSGGFRLVTSF
GEVAQYSKPQPALMPDVNATLQSIGQWKYIIQTDLTQAFYQIPLARKSVK
YCGISTPFRGARVYARSAMGMPGSETALEELLSRVLGELIENGYVAKVAD
DLYCGGNTPRELLSNWRKVLTALNTNKLTLSARKTVIAPKSATILGWIWS
EGTLKASSHRISTLSTCARPDKVKGLRSYLGAYKFLSRVIPNCSTYLAPL
ESLVAGKASTDALNWTDELLQVFRDSQLHLHNNRSITIPQPDDQLWIVTD
G Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | GENE3D | 3.30.70.270 | | coord: 498..588
e-value: 1.5E-13
score: 50.5 |
| None | No IPR available | GENE3D | 3.10.10.10 | | coord: 279..416
e-value: 3.9E-9
score: 36.1 |
| None | No IPR available | GENE3D | 3.30.70.270 | | coord: 417..497
e-value: 1.6E-7
score: 30.7 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 83..105 |
| None | No IPR available | CDD | cd00303 | retropepsin_like | coord: 184..270
e-value: 6.87645E-10
score: 55.4204 |
| None | No IPR available | SUPERFAMILY | 56672 | DNA/RNA polymerases | coord: 293..600 |
| IPR000477 | Reverse transcriptase domain | PFAM | PF00078 | RVT_1 | coord: 357..497
e-value: 2.3E-7
score: 30.5 |
| IPR000477 | Reverse transcriptase domain | PROSITE | PS50878 | RT_POL | coord: 318..499
score: 9.819 |
| IPR021109 | Aspartic peptidase domain | GENE3D | 2.40.70.10 | | coord: 174..272
e-value: 2.5E-10
score: 40.1 |
Blast
The following BLAST results are available for this feature:
|
