TCONS_00042495-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00042495-protein
Unique NameTCONS_00042495-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1253

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00042495-protein ID=TCONS_00042495-protein|Name=TCONS_00042495-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1253bp
MLPSSLATLPQQAVLCSLSNLISATNEWGNGAIEMFNTICTDQSFDVKIV
EKESAKIQVEMVNKANQQDISKMLIAANFAKSKDQPLTPEPAATPKPAAT
PKLSYKSPAVTEKEVAYCTQACSSTLLKVQLQKYEDQLNALMEKLSTEAX
VQLQKYEDQLNALMEKLSTEAPNCQAVSSTDVGTPCLAVFTEDEGWYRAE
ITKSNGDNATVSFVDYGNTQDCKVSSLKSPSSEMVQLPRTCIDCILHDVS
ATDIDSSKSLEHLKSTLVDQQVTLEVKVPLDKNNSLEAYVYQDGSDDHVN
DLLYSLFALEEESVAETQPPASQPTPQAPVVKAQPSLPANLSYQSPIVTK
KEVAYCMQACSSTLLKVQLQKYEDQLIALMEKLSTEAPNCQAVSSTNVGT
PCLAVFTEDEGWYRAEITKSNGDNATVSFVDYGNTQDCKVSSLKSPSSEM
VQLPRTCIDCILHDVSATDIDSSKSLEHLKSTLVDQQVTLEVKVPLDKNN
SLEAYVYQDGSEDHVNDLLYSLFALEEESVAETQPPASQPAPQAPEEKAK
PTPPANLSYQSPIVTEKEIAYCMQACSSTLLKVQLQKYEDQLNALMEKLS
TEAPNCQAVSSTNVGTPCLAVFTEDEGWYRAEITKSNGDNATVSFVDYGN
TQDCKVSSLKSPSSEMVQLPRTCIDCILHDVSDTDIDSSKSLEHLKSTLV
DQQVTLEVKVPLDKNNSLEAYVYQDGSDDHVNDLLYSLFALEEESVAETQ
PPASQPTPQAPVVKAQPSLPANLSYQSPIVTKKEVAYCMQACSSTLLKVQ
LQKYEDQLNALMEKLSTEAPNCQAVSSTNVGTPCLAVFTEDEGWYRAEIT
KSNGDNATVSFVDYGNTQDCKVSSLKSPSSEMVQLPRTCIDCILHDVSAT
DIDSSKSLEHLKSTLVDQQVTLEVKVSLDKNNSLEAYVYQDGSDDHVNDL
LYSLFALEGSEETEPFIETQPSEVVPVVDEQPKQEPAKSPGSQITQGTSI
AYPEIILENNYSAVCYVIDDATHLRCQLTQFQGQIDQMMVHIANSVGEYP
PLEACEEGKVCVAKYAADGGWYRARIAKKDDQGAHVYFVDFGNIEVIPES
DLKAIPIECTALPQTCITVQLNDVHPEDLDTNAAKAWLVEQLLERVVRLE
VKNKEGVDVISANVYSEGRDHHVNDQLYEMFALEEDVVIEETVSETQSVS
EIQSEAPTPTPVEPVKSTFIQPNLSVGEKLPAICYLVESATVLKCQLSSX
ISF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_026322XLOC_026322Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00042495TCONS_00042495Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002999Tudor
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 794..814
NoneNo IPR availableCOILSCoilCoilcoord: 578..598
NoneNo IPR availableCOILSCoilCoilcoord: 151..166
NoneNo IPR availableCOILSCoilCoilcoord: 124..149
NoneNo IPR availableGENE3D2.30.30.140coord: 1053..1093
e-value: 3.6E-16
score: 58.3
NoneNo IPR availableGENE3D2.30.30.140coord: 367..434
e-value: 2.2E-14
score: 52.7
coord: 583..650
e-value: 2.8E-15
score: 55.6
coord: 799..866
e-value: 2.8E-15
score: 55.6
coord: 151..218
e-value: 3.8E-15
score: 55.1
NoneNo IPR availableGENE3D2.40.50.90coord: 867..954
e-value: 5.5E-12
score: 45.4
coord: 1..84
e-value: 4.0E-12
score: 45.9
coord: 651..739
e-value: 1.4E-11
score: 44.2
coord: 435..523
e-value: 2.0E-11
score: 43.6
coord: 219..307
e-value: 1.1E-11
score: 44.4
coord: 1094..1182
e-value: 1.0E-11
score: 44.6
NoneNo IPR availableCDDcd04508TUDORcoord: 1058..1104
e-value: 6.33211E-15
score: 70.3195
NoneNo IPR availableCDDcd04508TUDORcoord: 615..660
e-value: 1.3353E-12
score: 63.7711
NoneNo IPR availableCDDcd04508TUDORcoord: 399..444
e-value: 1.3353E-12
score: 63.7711
NoneNo IPR availableCDDcd04508TUDORcoord: 183..228
e-value: 1.3353E-12
score: 63.7711
NoneNo IPR availableCDDcd04508TUDORcoord: 831..876
e-value: 1.3353E-12
score: 63.7711
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 806..897
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 590..681
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 374..465
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 1035..1124
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 158..249
IPR002999Tudor domainSMARTSM00333TUDOR_7coord: 178..235
e-value: 7.4E-9
score: 45.4
coord: 826..883
e-value: 6.6E-9
score: 45.6
coord: 394..451
e-value: 6.6E-9
score: 45.6
coord: 1053..1110
e-value: 7.5E-12
score: 55.4
coord: 610..667
e-value: 6.6E-9
score: 45.6
IPR002999Tudor domainPFAMPF00567TUDORcoord: 1010..1122
e-value: 1.5E-19
score: 70.1
coord: 567..679
e-value: 1.0E-19
score: 70.6
coord: 783..895
e-value: 1.2E-19
score: 70.4
coord: 351..463
e-value: 5.2E-19
score: 68.4
coord: 151..247
e-value: 8.2E-18
score: 64.5
IPR002999Tudor domainPROSITEPS50304TUDORcoord: 395..453
score: 16.688
IPR002999Tudor domainPROSITEPS50304TUDORcoord: 1054..1112
score: 17.333
IPR002999Tudor domainPROSITEPS50304TUDORcoord: 611..669
score: 16.688
IPR002999Tudor domainPROSITEPS50304TUDORcoord: 827..885
score: 16.688
IPR002999Tudor domainPROSITEPS50304TUDORcoord: 179..237
score: 16.648

Blast
BLAST of TCONS_00042495-protein vs. Swiss-Prot (Human)
Match: TDRD1 (Tudor domain-containing protein 1 OS=Homo sapiens GN=TDRD1 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 6.336e-28
Identity = 173/761 (22.73%), Postives = 320/761 (42.05%), Query Frame = 0
Query:    2 LPSSLATLPQQAVLCSLSNLISATNEWGNGAIEMFNTICTDQSFDVKIV---EKESAKIQVEMVNKANQQDISKMLIAANFA-KSKDQPLTPEPAATPKPAATPKLSYKSPAVTEKEVAYCTQACSSTLLKVQLQKYEDQLNALMEKLSTEAXVQLQKYED-----QLNALMEKLSTEAPNCQAVSSTDVGTPCLAVFTEDEGWYRAEITK-SNGDNATVSFVDYGNTQDCKVSSLKSPSSEMVQLPRTCIDCILHDVS-ATDIDSSKSLEHLKSTLVDQQVTLEVKVPLDKNNSLEAYVYQDGSDDHVND---LLYSLFALEEESVAETQPPASQPTPQAPVVKAQPSLPANLSYQSPIVTKK-EVAYCM-----QACSSTLLKVQLQKYEDQLIALMEKLSTEAPNCQAVSSTNVGTPCLAVFTEDEGWYRAEITK--SNGDNATVSFVDYGNTQDCKVSSLKSPSSEMVQLPRTCIDCILHDVSATDIDSSK-------------SLEHLKSTLVDQQVTLEVK------------VPLDKNNSLE-AYVYQDGSEDHV---NDLLYSLFALEEESVAETQPPASQPAPQAPEEKAKPTPPANLSYQSPI-VTEKEIAYCMQACSSTLLKVQLQKYEDQLNALMEKLSTEAPNCQAVSSTNVGTPCLAVFTEDEGWYRAEITKSNGDNATVSFVDYGNTQDCKVSSLKSPSSEMVQLPRTCIDCILHDVSDTDIDSSK-SLEHLKSTLVDQQVTLEVK 709
            L  ++   P  A+ C ++N+I A   W +  I+    +  +Q   +KIV   E+E     VE+    + + +  +LI   +  K   Q    E A    P    K++ ++  V +K         S  + KV      D+   ++  + T      Q+ +      +L A + K   + P  ++     +G  C A F+ED+ WYRA +   ++ ++  V +VDYGN +   +  L     ++++LP   I C+L  V  +  I + +++  +K  + ++ +T++V   L+ ++ +E  +       HV+    LL + FA+ E+S+   +P   + T     V+ + + P   ++    V +  +V  C+     +     L +  L+K  D   +L E    + PN        +G PC A F  D  WYRA + +   NG +  V FVDYGN ++     L+  SS  + LP   I C L D+ + +   S+              L+     + +  + +E+             V +D++  L+ A  ++D   D +   ++L   +  L+  S AE       P  +  +         NL Y  P  + E +   CM       L  +L +Y              AP  +      +G  C A +T D+ WYRA +  ++  +  V + DYGN +   +  ++  +S  + LP   I C L  + + +  SS+  +  LK+ +++Q V L VK
Sbjct:  365 LNRNIDLFPPCAIKCFVANVIPAEGNWSSDCIKATKPLLMEQYCSIKIVDILEEEVVTFAVEVELPNSGKLLDHVLIEMGYGLKPSGQDSKKENADQSDPEDVGKMTTENNIVVDK---------SDLIPKVLTLNVGDEFCGVVAHIQTPEDFFCQQLQSGRKLAELQASLSKYCDQLPP-RSDFYPAIGDICCAQFSEDDQWYRASVLAYASEESVLVGYVDYGNFEILSLMRLCPIIPKLLELPMQAIKCVLAGVKPSLGIWTPEAICLMKKLVQNKIITVKVVDKLENSSLVE--LIDKSETPHVSVSKVLLDAGFAVGEQSMVTDKPSDVKETSVPLGVEGKVN-PLEWTWVELGVDQTVDVVVCVIYSPGEFYCHVLKEDALKKLNDLNKSLAEHCQQKLPNG---FKAEIGQPCCAFFAGDGSWYRALVKEILPNG-HVKVHFVDYGNIEEVTADELRMISSTFLNLPFQGIRCQLADIQSRNKHWSEEAITRFQMCVAGIKLQARVVEVTENGIGVELTDLSTCYPRIISDVLIDEHLVLKSASPHKDLPNDRLVNKHELQVHVQGLQATSSAEQWKTIELPVDKTIQANVLEIISPNLFYALPKGMPENQEKLCM-------LTAELLEY------------CNAPKSRPPYRPRIGDACCAKYTSDDFWYRAVVLGTSDTDVEVLYADYGNIETLPLCRVQPITSSHLALPFQIIRCSLEGLMELNGSSSQLIIMLLKNFMLNQNVMLSVK 1089          

HSP 2 Score: 100.138 bits (248), Expect = 3.665e-21
Identity = 130/552 (23.55%), Postives = 240/552 (43.48%), Query Frame = 0
Query:  399 GTPCLAVFTEDEGWYRAEITKSN--GDNATVSFVDYGNTQDCKVSSLKSPSSEMVQLPRTCIDCILHDVSATDID-SSKSLEHLKSTLVDQQVTLEVKVPLDK---NNSLEAYVYQDGSE-DHVNDLLYSLFALEEESVAETQPPASQPAPQAPEEKAKPTPPANLSYQSPIVTEK--------------------------EIAYCMQACSSTLL---KVQLQKYEDQLNALMEKLSTEAPNCQAVSSTNVGTPCLAVFTEDEGWYRAEITK-SNGDNATVSFVDYGNTQDCKVSSLKSPSSEMVQLPRTCIDCILHDVSDT-DIDSSKSLEHLKSTLVDQQVTLEVKVPLDKNNSLEAYVYQDGSDDHVND---LLYSLFALEEESVAETQPPASQPTPQAPVVKAQPSLPANLSYQSPIVTKK-EVAYCM-----QACSSTLLKVQLQKYEDQLNALMEKLSTEAPNCQAVSSTNVGTPCLAVFTEDEGWYRAEITK--SNGDNATVSFVDYGNTQDCKVSSLKSPSSEMVQLPRTCIDCILHDVSATD 901
            G  C+A +T D+ W RA I   +     A V ++DYGN +   ++ +   +  +   P   I C + +V   + + SS  ++  K  L++Q  ++++   L++     ++E  +   G   DHV  L+   + L+         P+ Q + +   +++ P     ++ ++ IV +K                          E  +C Q  S   L   +  L KY DQL           P      +  +G  C A F+ED+ WYRA +   ++ ++  V +VDYGN +   +  L     ++++LP   I C+L  V  +  I + +++  +K  + ++ +T++V   L+ ++ +E  +       HV+    LL + FA+ E+S+   +P   + T     V+ + + P   ++    V +  +V  C+     +     L +  L+K  D   +L E    + PN        +G PC A F  D  WYRA + +   NG +  V FVDYGN ++     L+  SS  + LP   I C L D+ + +
Sbjct:  316 GEVCIAKYTVDQTWNRAIIQNVDVQQKKAHVLYIDYGNEEIIPLNRIYHLNRNIDLFPPCAIKCFVANVIPAEGNWSSDCIKATKPLLMEQYCSIKIVDILEEEVVTFAVEVELPNSGKLLDHV--LIEMGYGLK---------PSGQDSKKENADQSDPEDVGKMTTENNIVVDKSDLIPKVLTLNVGDEFCGVVAHIQTPEDFFCQQLQSGRKLAELQASLSKYCDQL----------PPRSDFYPA--IGDICCAQFSEDDQWYRASVLAYASEESVLVGYVDYGNFEILSLMRLCPIIPKLLELPMQAIKCVLAGVKPSLGIWTPEAICLMKKLVQNKIITVKVVDKLENSSLVE--LIDKSETPHVSVSKVLLDAGFAVGEQSMVTDKPSDVKETSVPLGVEGKVN-PLEWTWVELGVDQTVDVVVCVIYSPGEFYCHVLKEDALKKLNDLNKSLAEHCQQKLPNG---FKAEIGQPCCAFFAGDGSWYRALVKEILPNG-HVKVHFVDYGNIEEVTADELRMISSTFLNLPFQGIRCQLADIQSRN 837          
The following BLAST results are available for this feature:
BLAST of TCONS_00042495-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TDRD16.336e-2822.73Tudor domain-containing protein 1 OS=Homo sapiens ... [more]
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