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Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00042495-protein ID=TCONS_00042495-protein|Name=TCONS_00042495-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1253bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00042495-protein vs. Swiss-Prot (Human)
Match: TDRD1 (Tudor domain-containing protein 1 OS=Homo sapiens GN=TDRD1 PE=1 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 6.336e-28 Identity = 173/761 (22.73%), Postives = 320/761 (42.05%), Query Frame = 0
Query: 2 LPSSLATLPQQAVLCSLSNLISATNEWGNGAIEMFNTICTDQSFDVKIV---EKESAKIQVEMVNKANQQDISKMLIAANFA-KSKDQPLTPEPAATPKPAATPKLSYKSPAVTEKEVAYCTQACSSTLLKVQLQKYEDQLNALMEKLSTEAXVQLQKYED-----QLNALMEKLSTEAPNCQAVSSTDVGTPCLAVFTEDEGWYRAEITK-SNGDNATVSFVDYGNTQDCKVSSLKSPSSEMVQLPRTCIDCILHDVS-ATDIDSSKSLEHLKSTLVDQQVTLEVKVPLDKNNSLEAYVYQDGSDDHVND---LLYSLFALEEESVAETQPPASQPTPQAPVVKAQPSLPANLSYQSPIVTKK-EVAYCM-----QACSSTLLKVQLQKYEDQLIALMEKLSTEAPNCQAVSSTNVGTPCLAVFTEDEGWYRAEITK--SNGDNATVSFVDYGNTQDCKVSSLKSPSSEMVQLPRTCIDCILHDVSATDIDSSK-------------SLEHLKSTLVDQQVTLEVK------------VPLDKNNSLE-AYVYQDGSEDHV---NDLLYSLFALEEESVAETQPPASQPAPQAPEEKAKPTPPANLSYQSPI-VTEKEIAYCMQACSSTLLKVQLQKYEDQLNALMEKLSTEAPNCQAVSSTNVGTPCLAVFTEDEGWYRAEITKSNGDNATVSFVDYGNTQDCKVSSLKSPSSEMVQLPRTCIDCILHDVSDTDIDSSK-SLEHLKSTLVDQQVTLEVK 709
L ++ P A+ C ++N+I A W + I+ + +Q +KIV E+E VE+ + + + +LI + K Q E A P K++ ++ V +K S + KV D+ ++ + T Q+ + +L A + K + P ++ +G C A F+ED+ WYRA + ++ ++ V +VDYGN + + L ++++LP I C+L V + I + +++ +K + ++ +T++V L+ ++ +E + HV+ LL + FA+ E+S+ +P + T V+ + + P ++ V + +V C+ + L + L+K D +L E + PN +G PC A F D WYRA + + NG + V FVDYGN ++ L+ SS + LP I C L D+ + + S+ L+ + + + +E+ V +D++ L+ A ++D D + ++L + L+ S AE P + + NL Y P + E + CM L +L +Y AP + +G C A +T D+ WYRA + ++ + V + DYGN + + ++ +S + LP I C L + + + SS+ + LK+ +++Q V L VK
Sbjct: 365 LNRNIDLFPPCAIKCFVANVIPAEGNWSSDCIKATKPLLMEQYCSIKIVDILEEEVVTFAVEVELPNSGKLLDHVLIEMGYGLKPSGQDSKKENADQSDPEDVGKMTTENNIVVDK---------SDLIPKVLTLNVGDEFCGVVAHIQTPEDFFCQQLQSGRKLAELQASLSKYCDQLPP-RSDFYPAIGDICCAQFSEDDQWYRASVLAYASEESVLVGYVDYGNFEILSLMRLCPIIPKLLELPMQAIKCVLAGVKPSLGIWTPEAICLMKKLVQNKIITVKVVDKLENSSLVE--LIDKSETPHVSVSKVLLDAGFAVGEQSMVTDKPSDVKETSVPLGVEGKVN-PLEWTWVELGVDQTVDVVVCVIYSPGEFYCHVLKEDALKKLNDLNKSLAEHCQQKLPNG---FKAEIGQPCCAFFAGDGSWYRALVKEILPNG-HVKVHFVDYGNIEEVTADELRMISSTFLNLPFQGIRCQLADIQSRNKHWSEEAITRFQMCVAGIKLQARVVEVTENGIGVELTDLSTCYPRIISDVLIDEHLVLKSASPHKDLPNDRLVNKHELQVHVQGLQATSSAEQWKTIELPVDKTIQANVLEIISPNLFYALPKGMPENQEKLCM-------LTAELLEY------------CNAPKSRPPYRPRIGDACCAKYTSDDFWYRAVVLGTSDTDVEVLYADYGNIETLPLCRVQPITSSHLALPFQIIRCSLEGLMELNGSSSQLIIMLLKNFMLNQNVMLSVK 1089 HSP 2 Score: 100.138 bits (248), Expect = 3.665e-21 Identity = 130/552 (23.55%), Postives = 240/552 (43.48%), Query Frame = 0
Query: 399 GTPCLAVFTEDEGWYRAEITKSN--GDNATVSFVDYGNTQDCKVSSLKSPSSEMVQLPRTCIDCILHDVSATDID-SSKSLEHLKSTLVDQQVTLEVKVPLDK---NNSLEAYVYQDGSE-DHVNDLLYSLFALEEESVAETQPPASQPAPQAPEEKAKPTPPANLSYQSPIVTEK--------------------------EIAYCMQACSSTLL---KVQLQKYEDQLNALMEKLSTEAPNCQAVSSTNVGTPCLAVFTEDEGWYRAEITK-SNGDNATVSFVDYGNTQDCKVSSLKSPSSEMVQLPRTCIDCILHDVSDT-DIDSSKSLEHLKSTLVDQQVTLEVKVPLDKNNSLEAYVYQDGSDDHVND---LLYSLFALEEESVAETQPPASQPTPQAPVVKAQPSLPANLSYQSPIVTKK-EVAYCM-----QACSSTLLKVQLQKYEDQLNALMEKLSTEAPNCQAVSSTNVGTPCLAVFTEDEGWYRAEITK--SNGDNATVSFVDYGNTQDCKVSSLKSPSSEMVQLPRTCIDCILHDVSATD 901
G C+A +T D+ W RA I + A V ++DYGN + ++ + + + P I C + +V + + SS ++ K L++Q ++++ L++ ++E + G DHV L+ + L+ P+ Q + + +++ P ++ ++ IV +K E +C Q S L + L KY DQL P + +G C A F+ED+ WYRA + ++ ++ V +VDYGN + + L ++++LP I C+L V + I + +++ +K + ++ +T++V L+ ++ +E + HV+ LL + FA+ E+S+ +P + T V+ + + P ++ V + +V C+ + L + L+K D +L E + PN +G PC A F D WYRA + + NG + V FVDYGN ++ L+ SS + LP I C L D+ + +
Sbjct: 316 GEVCIAKYTVDQTWNRAIIQNVDVQQKKAHVLYIDYGNEEIIPLNRIYHLNRNIDLFPPCAIKCFVANVIPAEGNWSSDCIKATKPLLMEQYCSIKIVDILEEEVVTFAVEVELPNSGKLLDHV--LIEMGYGLK---------PSGQDSKKENADQSDPEDVGKMTTENNIVVDKSDLIPKVLTLNVGDEFCGVVAHIQTPEDFFCQQLQSGRKLAELQASLSKYCDQL----------PPRSDFYPA--IGDICCAQFSEDDQWYRASVLAYASEESVLVGYVDYGNFEILSLMRLCPIIPKLLELPMQAIKCVLAGVKPSLGIWTPEAICLMKKLVQNKIITVKVVDKLENSSLVE--LIDKSETPHVSVSKVLLDAGFAVGEQSMVTDKPSDVKETSVPLGVEGKVN-PLEWTWVELGVDQTVDVVVCVIYSPGEFYCHVLKEDALKKLNDLNKSLAEHCQQKLPNG---FKAEIGQPCCAFFAGDGSWYRALVKEILPNG-HVKVHFVDYGNIEEVTADELRMISSTFLNLPFQGIRCQLADIQSRN 837 The following BLAST results are available for this feature:
BLAST of TCONS_00042495-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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