TCONS_00042417-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00042417-protein
Unique NameTCONS_00042417-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length468

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00042417-protein ID=TCONS_00042417-protein|Name=TCONS_00042417-protein|organism=Clytia hemisphaerica|type=polypeptide|length=468bp
LIYVCISEFRCKWFVLIYIRTLETASLSCLFKASVLPHGPFSVLHLPSAD
CCIFAVLYPVLWCCASNQIMLSQRLFFTILMFLTTPPLTPTPAAEDDTTN
ATRKKKCPGCQRNHDIHTFGPPGRNCQGPVSPSSSTHSPNRTRSSRVASP
IDSGKNPNAGAMSDEQLNQYRQHLQLLKNQESELLESIRLEQENYLREEN
TLKDEIQRQTEKLERLKAARNRPSRPATPPANQNNISRSGETRSTESAIF
NSSDNMSTLLHRPLLSHQQTSAGTSFGFAATGATVPLLNSGLNGQDPSFV
NRRFTQNELFLRPTRTNDITRDFASSLLADVQFYREATYAVNTRKAYRTH
RKVYLQFCHMFDIQPAPADCIHICMYAAYLARFLLPQSVCVYLNFVGLLH
REMGFPNPLLDNWFLSSVLKGIKRSKGIPPVPKLPITVDILSFIHSQLNL
LDSKQASFWALCLVSFFG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_026258XLOC_026258Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00042417TCONS_00042417Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023109Integrase_recombinase_N
IPR010998Integrase_Lambda-type_N
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 167..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..245
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..162
IPR023109Integrase/recombinase, N-terminalGENE3D1.10.150.130coord: 324..429
e-value: 5.5E-4
score: 19.6
IPR010998Integrase, Lambda-type, N-terminalSUPERFAMILY47823lambda integrase-like, N-terminal domaincoord: 328..427

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042417-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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