TCONS_00042404-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00042404-protein
Unique NameTCONS_00042404-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length122

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00042404-protein ID=TCONS_00042404-protein|Name=TCONS_00042404-protein|organism=Clytia hemisphaerica|type=polypeptide|length=122bp
HYDRMKPWKKLEEEQNTKTRQTQNGVASDEPQESENDIETVREAEIQHDH
EEQLPEDYYLVEKLIKHKRNKKGTKFLVKWLNYEKEENSWEPEENIPKEI
IEQYWXSWEPEENIPKEIIEQY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_026248XLOC_026248Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00042404TCONS_00042404Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000953Chromo/chromo_shadow_dom
IPR023780Chromo_domain
IPR023779Chromodomain_CS
IPR016197Chromodomain-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000953Chromo/chromo shadow domainSMARTSM00298chromo_7coord: 58..109
e-value: 3.1E-8
score: 43.4
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 59..122
score: 15.055
IPR023780Chromo domainPFAMPF00385Chromocoord: 59..105
e-value: 3.1E-14
score: 52.5
NoneNo IPR availableGENE3D2.40.50.40coord: 46..105
e-value: 4.4E-15
score: 54.7
NoneNo IPR availableGENE3D2.40.50.40coord: 106..122
e-value: 0.069
score: 12.4
NoneNo IPR availableCDDcd00024CHROMOcoord: 59..105
e-value: 8.08441E-6
score: 38.3991
IPR023779Chromo domain, conserved sitePROSITEPS00598CHROMO_1coord: 76..96
IPR016197Chromo domain-likeSUPERFAMILY54160Chromo domain-likecoord: 51..105

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042404-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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