TCONS_00042398-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00042398-protein
Unique NameTCONS_00042398-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length144

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00042398-protein ID=TCONS_00042398-protein|Name=TCONS_00042398-protein|organism=Clytia hemisphaerica|type=polypeptide|length=144bp
MKQYANTNKLNEEQPVWYTLQSPAPVVGGGADDNIGELVLGLKYDNEQLI
VTVKEAKGLTSLTPNKMPNPFVKCYLLPDKSRKSKRKTGVQKKTNNPMWN
EKFTYKHVSIDDLNTRAIEITVWDYDSSAHQFLGKRCVFSLXEA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_026242XLOC_026242Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00042398TCONS_00042398Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainPRINTSPR00360C2DOMAINcoord: 118..126
score: 42.89
coord: 64..76
score: 33.45
coord: 93..106
score: 48.92
IPR000008C2 domainSMARTSM00239C2_3ccoord: 48..143
e-value: 4.9E-12
score: 56.0
IPR000008C2 domainGENE3D2.60.40.150coord: 30..143
e-value: 4.5E-26
score: 90.7
IPR000008C2 domainPFAMPF00168C2coord: 48..136
e-value: 3.1E-19
score: 69.1
IPR000008C2 domainPROSITEPS50004C2coord: 48..137
score: 16.835
IPR000008C2 domainSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 32..137

Blast
[Close]
BLAST of TCONS_00042398-protein vs. Swiss-Prot (Human)
Match: RIMS1 (Regulating synaptic membrane exocytosis protein 1 OS=Homo sapiens GN=RIMS1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 9.131e-19
Identity = 46/105 (43.81%), Postives = 58/105 (55.24%), Query Frame = 0 
Query:   36 GELVLGLKYDN--EQLIVTVKEAKGLTSLTPNKMPNPFVKCYLLPDKSRKSKRKTGVQKKTNNPMWNEKFTYKHVSIDDLNTRAIEITVWD---YDSSAHQFLGK 135
            G+L + L YD    QLIV V +A  L +    +  NP+VK Y LPD+S KSKR+T   KK   P WN+ F Y HV   D   R +EITVWD         +FLG+
Sbjct:  744 GQLSVKLWYDKVGHQLIVNVLQATDLPARVDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKILEPKWNQTFVYSHVHRRDFRERMLEITVWDQPRVQEEESEFLGE 848
The following BLAST results are available for this feature:
BLAST of TCONS_00042398-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RIMS19.131e-1943.81Regulating synaptic membrane exocytosis protein 1 ... [more]
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