TCONS_00042177-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00042177-protein
Unique NameTCONS_00042177-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length416

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00042177-protein ID=TCONS_00042177-protein|Name=TCONS_00042177-protein|organism=Clytia hemisphaerica|type=polypeptide|length=416bp
VCCNLYKRNFGYKWSRFANSTMKHQQNHYVSLLVIFYILCFRTNLCVARE
RSFISPKDRLKDPIRVIQFANKTATHIVAENGNDVTLDCRVSGNMNATHW
WFKINPENGKHTFLSSSSILTLKDLRSSDSGQYTCIVNAQSAKNQRNFTV
NVPSYRYTIKIPLLLKQLGPNPNVNSQTSIDVGEHVRLQCHEESSKQSYY
GYRVEFRWIRWKKNFNPTILQNIGRDIMKNKLDFTKYPFVEEIPSSEYKV
FIHMRYDNNVRFGRLHSSDLTLSQVTEDDQGYYSCVASNSFGFDFLTRYV
AVNKVHDIESPRINILKVVLIALGAGLIFGISIICTVCRLIKLRGDKQRA
LPVEEIGLVEIHRNDQQGVRHEENVYIIDSSPAIVQAKKRNPKRTNEELY
HDPQGIIHWCLTHFFI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_026046XLOC_026046Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00042177TCONS_00042177Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003598Ig_sub2
IPR003599Ig_sub
IPR013783Ig-like_fold
IPR007110Ig-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 80..142
e-value: 3.2E-7
score: 40.0
coord: 181..292
e-value: 0.021
score: 23.3
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 74..153
e-value: 1.1E-9
score: 48.2
coord: 175..303
e-value: 1.9E-5
score: 34.1
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 70..186
e-value: 6.0E-16
score: 58.1
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 187..303
e-value: 2.1E-11
score: 43.4
NoneNo IPR availablePFAMPF13927Ig_3coord: 75..137
e-value: 4.9E-11
score: 43.0
NoneNo IPR availableCDDcd00096Igcoord: 85..137
e-value: 1.41929E-6
score: 44.7875
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 172..303
score: 9.718
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 63..149
score: 12.386
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 75..152
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 178..224
coord: 252..302

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042177-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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