TCONS_00041961-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00041961-protein
Unique NameTCONS_00041961-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length113

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00041961-protein ID=TCONS_00041961-protein|Name=TCONS_00041961-protein|organism=Clytia hemisphaerica|type=polypeptide|length=113bp
ASRQFRKVKKVINHGGFISSTLSNDISLFELDQEVQINDYVRPACLLEKE
LAAGTKVVISGWGTTQEGSRPNILQKAEVDIVSNSVCNTKYDNGIDNSML
CAAAPGKDSCQVR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_025851XLOC_025851Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00041961TCONS_00041961Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001254Trypsin_dom
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 1..112
e-value: 3.5E-6
score: 7.6
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 3..111
e-value: 3.2E-25
score: 89.1
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 1..113
score: 13.38
NoneNo IPR availableGENE3D2.40.10.10coord: 1..31
e-value: 2.0E-7
score: 30.4
NoneNo IPR availableGENE3D2.40.10.10coord: 32..113
e-value: 5.4E-28
score: 97.3
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 3..111

Blast
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BLAST of TCONS_00041961-protein vs. Swiss-Prot (Human)
Match: TMPSC (Transmembrane protease serine 12 OS=Homo sapiens GN=TMPRSS12 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 8.218e-18
Identity = 42/96 (43.75%), Postives = 57/96 (59.38%), Query Frame = 0 
Query:   14 HGGFISSTLSNDISLFELDQEVQINDYVRPACL---LEKELAAGTKVVISGWG-TTQEGSRPNILQKAEVDIVSNSVCNTKYDNG--IDNSMLCAA 103
            H  FI  +  NDI+LF L + V+ NDY++P CL   + + L   TK  ISGWG T +EG+  NILQ AEV  +S  +CN++   G  I N+  CA 
Sbjct:  160 HPNFILESYVNDIALFHLKKAVRYNDYIQPICLPFDVFQILDGNTKCFISGWGRTKEEGNATNILQDAEVHYISREMCNSERSYGGIIPNTSFCAG 255
The following BLAST results are available for this feature:
BLAST of TCONS_00041961-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TMPSC8.218e-1843.75Transmembrane protease serine 12 OS=Homo sapiens G... [more]
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