TCONS_00041858-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00041858-protein
Unique NameTCONS_00041858-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length385

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00041858-protein ID=TCONS_00041858-protein|Name=TCONS_00041858-protein|organism=Clytia hemisphaerica|type=polypeptide|length=385bp
MAKSIFFCFPFFLSLIFFVYGDKRVTRNSTKVIDQTTYTIREYRFSKYPN
VEPTSFAQGSSLQQLTSVTPSDCGTSCKAKEECVSFLYYRVQPPTCTLLD
SPINRHSVRRNMSVDYYEIQNKCSENTTICNFGTCYPHFGNDSYTCYCKG
KSYGKNCERTNSAENPHVTCQEVKQLMPEAPSGMYWVGSVGAKNLLFCDM
ITDGGGWLRVGQINIRNNEEANAYNFNAIVKPFTSSIHNLSTSNYLLSGR
RFEVLNQMARITQFRVYCRKVTRGRTNHYTFDVSTSSGSNNKMFDHVLKN
DEPPPLNLCGKIKFLPDDDSKIQTFDCADLVPIIDYDDNKIRYRLYAGLK
KASASTGRKTAGTTVLKCDENDSNDKIGQWMFFIR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_025758XLOC_025758Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00041858TCONS_00041858Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003609Pan_app
IPR014716Fibrinogen_a/b/g_C_1
IPR013032EGF-like_CS
IPR000742EGF-like_dom
IPR002181Fibrinogen_a/b/g_C_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003609PAN/Apple domainSMARTSM00473ntp_6coord: 40..120
e-value: 5.1E-4
score: 29.4
IPR003609PAN/Apple domainPROSITEPS50948PANcoord: 39..123
score: 7.883
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 162..296
e-value: 3.3E-7
score: 29.8
NoneNo IPR availableGENE3D3.50.4.10coord: 44..114
e-value: 6.2E-4
score: 19.3
NoneNo IPR availableSUPERFAMILY57414Hairpin loop containing domain-likecoord: 44..118
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 146..157
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 126..158
score: 8.832
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 164..213

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00041858-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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