TCONS_00041712-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00041712-protein
Unique NameTCONS_00041712-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length388

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00041712-protein ID=TCONS_00041712-protein|Name=TCONS_00041712-protein|organism=Clytia hemisphaerica|type=polypeptide|length=388bp
MEEQAIAVAKYDYTAEGQGELSIRKNEKLTVIDDTQLWWKVQNEKSVSGY
VPSNYLARKDSVKGKKNIVKTIKEKLNTKKTNEVESPQADLQSPKLKGGG
KVLMVGTAKFKYIPQRDDEIELSKGDTVMILEMEHDGWCRGESNGKVGWL
PFNYLQKSEPQGEQASPSEYADPNDVMDKQIICKVRTLYPFNSQSSEELS
FEKDSILEIVDKPKDDPDWWQARKSSGEIGLVPRNYVDEIVSPVLTPGPV
KPKQGSNFPALSSSPAKAPPRDLDVNGKFNDRPWYHGSLKRQECENVLRT
HGEDGQYLVRNSESKPGDFSLSMKAPDRMKHFKITHTEDQYVIGQRSFDS
MDSLISHYEKAPIYTTEAGQKMYLTQPMSKSLTRNGYS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_025632XLOC_025632Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00041712TCONS_00041712Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR000980SH2
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001452SH3 domainPRINTSPR00452SH3DOMAINcoord: 228..240
score: 39.15
coord: 118..133
score: 28.67
coord: 5..15
score: 42.31
coord: 216..225
score: 32.61
IPR001452SH3 domainSMARTSM00326SH3_2coord: 183..241
e-value: 1.7E-18
score: 77.4
coord: 104..159
e-value: 2.7E-15
score: 66.8
coord: 5..60
e-value: 7.6E-15
score: 65.3
IPR001452SH3 domainPFAMPF00018SH3_1coord: 8..53
e-value: 1.9E-12
score: 46.5
coord: 187..233
e-value: 8.9E-12
score: 44.3
IPR001452SH3 domainPFAMPF14604SH3_9coord: 108..156
e-value: 2.0E-14
score: 53.0
IPR001452SH3 domainPROSITEPS50002SH3coord: 185..242
score: 16.25
IPR001452SH3 domainPROSITEPS50002SH3coord: 2..61
score: 15.12
IPR001452SH3 domainPROSITEPS50002SH3coord: 108..160
score: 13.351
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 6..58
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 106..161
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 178..272
IPR000980SH2 domainPRINTSPR00401SH2DOMAINcoord: 328..338
score: 29.35
coord: 347..361
score: 31.19
coord: 284..298
score: 41.19
coord: 316..327
score: 37.35
coord: 304..314
score: 50.45
IPR000980SH2 domainSMARTSM00252SH2_5coord: 282..364
e-value: 2.7E-30
score: 116.6
IPR000980SH2 domainPFAMPF00017SH2coord: 284..358
e-value: 8.0E-23
score: 80.2
IPR000980SH2 domainGENE3D3.30.505.10coord: 289..379
e-value: 7.1E-30
score: 102.4
IPR000980SH2 domainPROSITEPS50001SH2coord: 284..378
score: 22.135
IPR000980SH2 domainSUPERFAMILY55550SH2 domaincoord: 278..368
NoneNo IPR availableGENE3D2.30.30.40coord: 185..288
e-value: 3.6E-21
score: 74.1
NoneNo IPR availableGENE3D2.30.30.40coord: 55..129
e-value: 1.3E-12
score: 46.9
NoneNo IPR availableGENE3D2.30.30.40coord: 130..184
e-value: 9.4E-15
score: 53.5
NoneNo IPR availableGENE3D2.30.30.40coord: 1..54
e-value: 4.7E-17
score: 60.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 246..276
NoneNo IPR availableCDDcd11767SH3_Nck_3coord: 184..239
e-value: 2.1702E-28
score: 104.701

Blast
[Close]
BLAST of TCONS_00041712-protein vs. Swiss-Prot (Human)
Match: NCK2 (Cytoplasmic protein NCK2 OS=Homo sapiens GN=NCK2 PE=1 SV=2)

HSP 1 Score: 305.449 bits (781), Expect = 1.637e-101
Identity = 156/397 (39.29%), Postives = 241/397 (60.71%), Query Frame = 0 
Query:    1 MEEQAIAVAKYDYTAEGQGELSIRKNEKLTVIDDTQLWWKVQNEKSVSGYVPSNYLARKDSVKGKKNIVKTIKEKLNTKKTNEVES-------PQADLQSPKLKGGGKVL----MVGTAKFKYIPQRDDEIELSKGDTVMILEMEHDGWCRGESNGKVGWLPFNYLQKSEPQGEQASPS-----EYADPNDVMDKQIICKVRTLYPFNSQSSEELSFEKDSILEIVDKPKDDPDWWQARKSSGEIGLVPRNYVDEIVSPVLTPGPVKPKQGSNFPALSSSPAKAPPRDL---DVNGKFNDRPWYHGSLKRQECENVLRTHGEDGQYLVRNSESKPGDFSLSMKAPDRMKHFKITHTEDQYVIGQRSFDSMDSLISHYEKAPIYTTEAGQKMYLTQPM 378
            M E+ I +AK+DYTA+   EL I+KNE+L ++DD++ WW+V+N  + +GYVPSNY+ RK+S+K K ++VK +K+ L   KT    S       P  D + P    G   +    +    KF Y+ +R+DE+ L KG  V ++E   DGW RG  NG++GW P NY+ +   +    SPS     + A  ++    +++  V+TLYPF+S + EEL+FEK   +E+++KP++DP+WW+ + + G++GLVP+NYV      VL+ GP            +  PA AP         +G+F  R WY+G++ R + E  L   G +G +L+R+SES P DFS+S+KA  + KHFK+   ++ Y IGQR F +MD L+ HY+KAPI+T+E G+K+YL + +
Sbjct:    1 MTEEVIVIAKWDYTAQQDQELDIKKNERLWLLDDSKTWWRVRNAANRTGYVPSNYVERKNSLK-KGSLVKNLKDTLGLGKTRRKTSARDASPTPSTDAEYPANGSGADRIYDLNIPAFVKFAYVAEREDELSLVKGSRVTVMEKCSDGWWRGSYNGQIGWFPSNYVLEEVDEAAAESPSFLSLRKGASLSNGQGSRVLHVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYV-----VVLSDGP------------ALHPAHAPQISYTGPSSSGRFAGREWYYGNVTRHQAECALNERGVEGDFLIRDSESSPSDFSVSLKASGKNKHFKVQLVDNVYCIGQRRFHTMDELVEHYKKAPIFTSEHGEKLYLVRAL 379
The following BLAST results are available for this feature:
BLAST of TCONS_00041712-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NCK21.637e-10139.29Cytoplasmic protein NCK2 OS=Homo sapiens GN=NCK2 P... [more]
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