TCONS_00041694-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00041694-protein
Unique NameTCONS_00041694-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length271

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00041694-protein ID=TCONS_00041694-protein|Name=TCONS_00041694-protein|organism=Clytia hemisphaerica|type=polypeptide|length=271bp
VSLLAFSDKKDRNKDLNEIQCTNTGCTEKFKWRMQLKRHLRKCNHERPIA
KVKKYTFSDGHYVCNTCFKRTKHQPNMSRHVNNCNPKKAQIYACDLCAQT
FEYKCRLVKHMKKHTSDSEKICPNCGKMFRRIDQFNLHKNLCEDFVPTFP
EELESPCPSLNFHVESPESLISNTLEISNVDVVDANVDVIETENDQIVPG
NTETVIQDLDLLSINSTPLSSRYNEVKDKSWSVRKQTQRKSANLENIIQN
LTSPIKKGVISNVISNHKKTX
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_025619XLOC_025619Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00041694TCONS_00041694Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 92..114
e-value: 0.017
score: 24.3
coord: 62..82
e-value: 62.0
score: 6.2
coord: 120..140
e-value: 88.0
score: 4.9
coord: 19..45
e-value: 0.17
score: 21.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 94..114
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 21..45
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 19..48
score: 9.162
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 92..119
score: 12.03
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 90..138
NoneNo IPR availableGENE3D3.30.60.60coord: 51..84
e-value: 3.9E-4
score: 19.7
coord: 85..104
e-value: 0.37
score: 10.1
NoneNo IPR availableGENE3D3.30.160.60coord: 127..135
e-value: 0.32
score: 10.7
NoneNo IPR availableGENE3D3.30.160.60coord: 136..196
e-value: 0.31
score: 10.9
NoneNo IPR availableGENE3D3.30.160.60coord: 105..126
e-value: 1.0E-8
score: 34.9
NoneNo IPR availableGENE3D3.30.160.60coord: 11..50
e-value: 0.042
score: 13.3

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00041694-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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