TCONS_00041380-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00041380-protein
Unique NameTCONS_00041380-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length123

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00041380-protein ID=TCONS_00041380-protein|Name=TCONS_00041380-protein|organism=Clytia hemisphaerica|type=polypeptide|length=123bp
QVLNEEITPTIKKLKEERSSYLEYQKVMRVIEHLTRLYVAYEFTKAEEFK
EKAGSELEKMNETISTLSARNQEISKEIARIDGEIDELQRKKDEVLGKIH
YGLMIGLPLPRTVKDQHNLNRHS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_025357XLOC_025357Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00041380TCONS_00041380Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 50..98
NoneNo IPR availableGENE3D1.20.5.730coord: 38..101
e-value: 2.0E-5
score: 24.1

Blast
[Close]
BLAST of TCONS_00041380-protein vs. Swiss-Prot (Human)
Match: SMC2 (Structural maintenance of chromosomes protein 2 OS=Homo sapiens GN=SMC2 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 7.847e-26
Identity = 53/98 (54.08%), Postives = 73/98 (74.49%), Query Frame = 0 
Query:    2 VLNEEITPTIKKLKEERSSYLEYQKVMRVIEHLTRLYVAYEFTKAEEFKEKAGSELEKMNETISTLSARNQEISKEIARIDGEIDELQRKKDEVLGKI 99
            +L EEITPTI+KLKEERSSYLEYQKVMR IEHL+RLY+AY+F  AE+ K ++  EL++M + +  L     E  K+I  ++ EI+EL+++KD+  G I
Sbjct:  198 ILEEEITPTIQKLKEERSSYLEYQKVMREIEHLSRLYIAYQFLLAEDTKVRSAEELKEMQDKVIKLQEELSENDKKIKALNHEIEELEKRKDKETGGI 295
The following BLAST results are available for this feature:
BLAST of TCONS_00041380-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SMC27.847e-2654.08Structural maintenance of chromosomes protein 2 OS... [more]
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