TCONS_00041294-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00041294-protein
Unique Name	TCONS_00041294-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	156

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00041294-protein ID=TCONS_00041294-protein|Name=TCONS_00041294-protein|organism=Clytia hemisphaerica|type=polypeptide|length=156bp
NVVERDDGADDEWSSIKDDMMQPDRLLDAKSKESHIVHCPYYPMEKHEYW
WVYLINKKNNQLVTAPQQVTNLKVTEKVQLKFSAPEKPGIYQYIVVVKSD
SYVDFDMTKPLKVAVSEAKDFDPGEHWNYSSEDDDKDDSGESVYETEEED
DDDDED

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_025283	XLOC_025283	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00041294	TCONS_00041294	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004179	Sec63-dom
IPR000008	C2_dom
IPR014756	Ig_E-set

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004179	Sec63 domain	PFAM	PF02889	Sec63	coord: 34..111 e-value: 5.5E-9 score: 35.5
IPR000008	C2 domain	GENE3D	2.60.40.150		coord: 4..124 e-value: 1.8E-27 score: 95.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..156
IPR014756	Immunoglobulin E-set	SUPERFAMILY	81296	E set domains	coord: 33..117

Blast

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BLAST of TCONS_00041294-protein vs. Swiss-Prot (Human)
Match: SEC63 (Translocation protein SEC63 homolog OS=Homo sapiens GN=SEC63 PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 3.400e-29
Identity = 63/139 (45.32%), Postives = 91/139 (65.47%), Query Frame = 0

Query:    5 RDDGADDEWSSIKDDMMQPDR-LLDAKSKESHIVHCPYYPMEKHEYWWVYLINKKNNQLVTAPQQVTNLKVTEKVQLKFSAPEKPGIYQYIVVVKSDSYVDFDMTKPLKVAVSEAKDFDPGEH--WNYSSE-DDDKDDS 139
            +DD A  EW  ++  + + +R LL+ KSK +H V+  Y+P EK E+WW+Y+ ++K   L++ P  V  LK TE+V+LKF AP KPG YQY V ++SDSY+  D  KPLK+ V EAK   P  H  W+ + E D+D++DS
Sbjct:  607 KDDEA--EWQELQQSIQRKERALLETKSKITHPVYSLYFPEEKQEWWWLYIADRKEQTLISMPYHVCTLKDTEEVELKFPAPGKPGNYQYTVFLRSDSYMGLDQIKPLKLEVHEAKPV-PENHPQWDTAIEGDEDQEDS 742

The following BLAST results are available for this feature:

BLAST of TCONS_00041294-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00041294-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SEC63	3.400e-29	45.32	Translocation protein SEC63 homolog OS=Homo sapien...	[more]

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TCONS_00041294-protein (polypeptide) - C. hemisphaerica