TCONS_00040952-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00040952-protein
Unique NameTCONS_00040952-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length466

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00040952-protein ID=TCONS_00040952-protein|Name=TCONS_00040952-protein|organism=Clytia hemisphaerica|type=polypeptide|length=466bp
MNGQNTNNHTHHQQGQPSNSQVPTSSETDPILIEGASANPSSSSHTGLSS
DDEVPVGTSREERLVKKLKVIDVLSPKSSIDIADNEVDNIIRPTFTRMNV
NQQQQQQLQQVSQPQQQQMQQQHYQQHLPNETHLPSIQKQRVDQFKQNHS
PKSISFGGTIPRNREPRTLPSRITLLVNGTRFVVNPCIFTKYPNTLLGRM
FNSSSDYVTTNEHGEYEVAQGITANVFKSILDYYKTGTINCPSSISCSEL
REACDYLLVPFNSQIVKAQNLCELLHELSNDGAREVFMSSFVENVILPKM
LRCAEKGNRECHLVILKDDDVVEWGEFPPANGEEYAEIVNNTALYRFFKY
FENRDVAKDVLIERGLKKVKLGIEGYPTHMEKVKYKQHGKPEVIYSYIQR
PFVHMSWEKEGSKSRHVDFQCVKPKTGISGAVDEPAALANDMDLPLPGEL
LSGDGFISNELHDNNE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_025001XLOC_025001Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00040952TCONS_00040952Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000210BTB/POZ_dom
IPR011333SKP1/BTB/POZ
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000210BTB/POZ domainSMARTSM00225BTB_4coord: 171..274
e-value: 4.8E-5
score: 32.8
NoneNo IPR availableGENE3D3.30.710.10coord: 160..285
e-value: 7.6E-22
score: 76.9
NoneNo IPR availablePFAMPF16017BTB_3coord: 172..275
e-value: 8.9E-42
score: 141.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..126
IPR011333SKP1/BTB/POZ domainSUPERFAMILY54695POZ domaincoord: 171..261

Blast
[Close]
BLAST of TCONS_00040952-protein vs. Swiss-Prot (Human)
Match: KCD20 (BTB/POZ domain-containing protein KCTD20 OS=Homo sapiens GN=KCTD20 PE=1 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 3.562e-112
Identity = 162/293 (55.29%), Postives = 211/293 (72.01%), Query Frame = 0 
Query:  146 KQNHSP---------KSISFGGTIPRNREPRTLPSRITLLVNGTRFVVNPCIFTKYPNTLLGRMFNSSSDYVTT--NEHGEYEVAQGITANVFKSILDYYKTGTINCPSSISCSELREACDYLLVPFNSQIVKAQNLCELLHELSNDGAREVFMSSFVENVILPKMLRCAEKGNRECHLVILKDDDVVEWGE-FPPANGEEYAEIVNNTALYRFFKYFENRDVAKDVLIERGLKKVKLGIEGYPTHMEKVKYKQHGKPEVIYSYIQRPFVHMSWEKEGSKSRHVDFQCVKPKT 426
            K+NH P          S+ FG     +      P ++TLLV+GTRFVVNP IFT +P+T+LGRMF    +Y  T  NE GEYE+A+GI+A VF+++LDYYKTG INCP  IS  +LR+ CDYL + F+   ++ Q+L  LLHELSNDGA + F   ++E +ILP M+ CA+KG RECH+V+L D+D V+W E  PP  GEEY++I+ ++ LYRFFKY ENRDVAK VL ERGLK +++GIEGYPT  EK+K +  G+ EVIY+Y+QRPF+ MSWEKE  KSRHVDFQCV+ K+
Sbjct:   88 KRNHEPFIAPERFGNSSVGFG-----SNSHSQAPEKVTLLVDGTRFVVNPQIFTAHPDTMLGRMFGPGREYNFTRPNEKGEYEIAEGISATVFRTVLDYYKTGIINCPDGISIPDLRDTCDYLCINFDFNTIRCQDLSALLHELSNDGAHKQF-DHYLEELILPIMVGCAKKGERECHIVVLTDEDSVDWDEDHPPPMGEEYSQILYSSKLYRFFKYIENRDVAKTVLKERGLKNIRIGIEGYPTCKEKIKRRPGGRSEVIYNYVQRPFIQMSWEKEEGKSRHVDFQCVRSKS 374
The following BLAST results are available for this feature:
BLAST of TCONS_00040952-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KCD203.562e-11255.29BTB/POZ domain-containing protein KCTD20 OS=Homo s... [more]
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