TCONS_00040848-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00040848-protein
Unique NameTCONS_00040848-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length470

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00040848-protein ID=TCONS_00040848-protein|Name=TCONS_00040848-protein|organism=Clytia hemisphaerica|type=polypeptide|length=470bp
NLFSQKFQNTPSTKNEIDHTINKLEKHINTVNKLIPEITINRTNHGINKD
IRKDIQEKRRLLKEYKRTRNPIIKNQVNRLIKKIQKAIKDSENRLMNKHI
DQANSKNSKESWKGINKILGQDPKPTIKKIFNPITKTDTSIKNEIAEIFK
NAQKEIFQGNETSDQENENDVNSWYNQQNFTTEPSNENFFTTDEISKTIK
NLKNNKAPGIDTIKNTLIKYLEPSLSPILKKIFDSCYDIGYFPKRWKEGK
VIMLYKNKGAKNDTKNYRPITLLNQFGKLFEKTLESKIRKWAEENNKINK
EQSGFRKKRNTNDQLYLLTQKIYEAFNRKSGIDAIFIDFEKCFDKIWKKG
LLYKLHLMNIPKKDLNIINSFLHNRKIYIQIENEKSNSFYPKEGLPQGSC
LSPLLFILFASDIPTKLNTMLSQFADDLALYARTSNNNYNHNIRLQKHLT
EIIKWCDKWKLKINIKKTKS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_024918XLOC_024918Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00040848TCONS_00040848Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 74..94
NoneNo IPR availableCOILSCoilCoilcoord: 48..68
NoneNo IPR availableCOILSCoilCoilcoord: 281..301
NoneNo IPR availableGENE3D3.30.70.270coord: 285..470
e-value: 1.1E-26
score: 93.1
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 248..470
e-value: 3.13886E-46
score: 160.149
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 115..469
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 261..469
e-value: 2.9E-45
score: 154.4
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 235..470
score: 24.926

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040848-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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