TCONS_00040800-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00040800-protein
Unique NameTCONS_00040800-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length377

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00040800-protein ID=TCONS_00040800-protein|Name=TCONS_00040800-protein|organism=Clytia hemisphaerica|type=polypeptide|length=377bp
MDKKWLQNRRQTTSTFILMNISLGIEQSITFASLFIYLKDVLHVSGNRLT
TFYSAISGIYFLSQIISSLALTRIFDKYRRLKLTFFIVNNFTIAGNALYT
LPYSPWCLLAGRLISGVAGCIKPIMVSELTRSFPKDELLPQISRFAFAFS
VGFTLGPFVNFVFLKADFRFLGIPITYANGAGLLITFLFILMQILTVFFV
TDLSREFDLKKSHKESQILEKERLLETQSLNEKEKIDLDLGNSGFDSKEE
LTLIEDTSDGQPCQPTLDLDNENHDDGSAPMLPSEPDKSIRNSLWTLFTS
IDVVLIFIFSFFVFFELITYDSWTPMLCTEILHWGIVEINLIFLGNSIAV
GIIYLACYFRPPAKEQFYTLAVYSFVA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_024873XLOC_024873Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00040800TCONS_00040800Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 2..237
e-value: 2.2E-15
score: 55.9
NoneNo IPR availableGENE3D1.20.1250.20coord: 287..359
e-value: 4.0E-5
score: 22.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 256..282
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 18..354
e-value: 2.6E-19
score: 69.3
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 30..201
e-value: 1.33963E-9
score: 56.5533
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 18..215
coord: 284..357

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040800-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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