TCONS_00040741-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00040741-protein
Unique NameTCONS_00040741-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length172

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00040741-protein ID=TCONS_00040741-protein|Name=TCONS_00040741-protein|organism=Clytia hemisphaerica|type=polypeptide|length=172bp
MDINLLPDEILEIIIAFSEKEDAKALSRTSKRMYNLTIERIXINLLPDEI
LEIIIAFSEKEDAKALSRTSKRIYNLTIERIWSKPRFYGKRNHSFLTKIT
KFPIKELHTNEFNCLWSNICDIISGLDLLHIDNDDDDETFEDRLDDICEI
AKPPIVLHTNALNMKYRDDFDL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_024822XLOC_024822Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00040741TCONS_00040741Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675L_dom-like
IPR001810F-box_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain, L domain-likeGENE3D3.80.10.10coord: 40..151
e-value: 6.7E-8
score: 31.2
coord: 1..39
e-value: 1.2E-4
score: 20.5
IPR001810F-box domainPFAMPF00646F-boxcoord: 2..36
e-value: 0.0045
score: 16.7
IPR001810F-box domainPROSITEPS50181FBOXcoord: 40..85
score: 8.756
IPR001810F-box domainSUPERFAMILY81383F-box domaincoord: 40..82
IPR001810F-box domainSUPERFAMILY81383F-box domaincoord: 3..38

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040741-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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