TCONS_00040580-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00040580-protein
Unique NameTCONS_00040580-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length312

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00040580-protein ID=TCONS_00040580-protein|Name=TCONS_00040580-protein|organism=Clytia hemisphaerica|type=polypeptide|length=312bp
MQYRIISLDHSFQYNTWFHNSSKRLYLYTNGPFYGKVPVEKAQQPTISNR
FCNHEGIQYHSTLVSCVERPAIGNTSVLKDKQWDNGKSDNCISLNKQRVK
GSLKRHLQFWRKNLEANLHILKVIEHGYRIPFRYNPPPFELKNNKSALRN
KKFVEETLEGLLRERKIFEVQRPFATNPLSVAEDPSGKKRLILDVSFLNQ
FLWKEKIKFDDWKVFEGFIHSDEEAYLFKFDLKSGYHHVDIHSDHQKYLG
FSWNFGKGPKRYFLYSVLPFGLSSGPLIFTKIVRVLIKFWRSHGIRIACF
LDDXELGASNFY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_024698XLOC_024698Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00040580TCONS_00040580Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 144..164
NoneNo IPR availableGENE3D3.10.10.10coord: 126..264
e-value: 2.7E-15
score: 56.0
NoneNo IPR availableGENE3D3.30.70.270coord: 265..311
e-value: 5.4E-4
score: 19.4
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 129..310
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 222..305
e-value: 1.7E-10
score: 40.7

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040580-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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