TCONS_00040393-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00040393-protein
Unique NameTCONS_00040393-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length323

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00040393-protein ID=TCONS_00040393-protein|Name=TCONS_00040393-protein|organism=Clytia hemisphaerica|type=polypeptide|length=323bp
MERTTETFYKLIKSDREQQTPCPRSGHCMAKNKNHVYIFGGFDEPSKTFR
DLWRYNTATKTWCKMPDLLDEAPQTSVSSSMVLVNNNLFVFGGTSFPFSK
QNSNELFLYDLTKQRWFNFSQALTTNSRHLQSQNHNIVIKTCGCKEIYDS
KPISKYGQSMVVTPDHGIFIYSGTLGTEYTDELHIFNLETFRWVEYKFCL
KHGIDSQGRYKSEAIVHEDRIYLFGGSNSEHYSSFDTIDTFDLVTHSWEK
VTTISTELDKDKQYVYPEPRKAHSCVKYGDNVYLMGGMRSIVVNGGKTTN
RLFNDVWILSLKSKAWSKISEVS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_024549XLOC_024549Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00040393TCONS_00040393Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015915Kelch-typ_b-propeller
IPR006652Kelch_1
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 204..323
e-value: 8.0E-22
score: 77.0
coord: 3..203
e-value: 9.4E-32
score: 109.6
NoneNo IPR availablePFAMPF13854Kelch_5coord: 266..313
e-value: 8.7E-10
score: 38.3
NoneNo IPR availableSUPERFAMILY117281Kelch motifcoord: 155..321
coord: 18..125
IPR006652Kelch repeat type 1PFAMPF01344Kelch_1coord: 23..68
e-value: 5.6E-11
score: 41.7
coord: 80..116
e-value: 2.9E-4
score: 20.3
coord: 213..253
e-value: 4.5E-7
score: 29.2

Blast
[Close]
BLAST of TCONS_00040393-protein vs. Swiss-Prot (Human)
Match: KLD10 (Kelch domain-containing protein 10 OS=Homo sapiens GN=KLHDC10 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 5.692e-39
Identity = 96/316 (30.38%), Postives = 150/316 (47.47%), Query Frame = 0 
Query:   16 REQQTPCPRSGH-CMAKNKNHVYIFGGFD-----------EPSKTFRDLWRYNTATKTWCKMPDLLDEAPQTSVSSSMVLVNNNLFVFGGTSFPFSKQNSNELFLYDLTKQRWFNFSQALTTNSRHLQSQNHNIVIKTCGCKEIYDSKPISKYGQSMVVTPDHGIFIYSGTLGTEYTDELHIFNLETFRWVEYKFCLKHGIDSQGRYKSEAIVHEDRIYLFGGSNSEHYSSFDTIDTFDLVTHSWEKVTTISTELDKDKQYVYPEPRKAHSCVKYGDNVYLMGGMRSIVVNGGKTTNRLFNDVWILSLKSKAWSKI 319
            R  + P  RSGH C+A N N +Y+FGG++           E    FR+LWRY+ AT  W +M       P+   S S+VL  NNL VFGGT  PF + N N++ + ++  +RW   S                       C+     KP   YGQ+M +  +  ++++ GT G  Y+ +LH  +L T  W + K         + RY+ E      RIY+ GG  S    S + I  ++L T++WE++ T   E     +  +P  R+ HSCV+  ++V++ GG    V+ G         D+W L+L++  W K+
Sbjct:   84 RGHRPPPARSGHRCVADNTN-LYVFGGYNPDYDESGGPDNEDYPLFRELWRYHFATGVWHQM-GTDGYMPRELASMSLVLHGNNLLVFGGTGIPFGESNGNDVHVCNVKYKRWALLS-----------------------CR---GKKPSRIYGQAMAII-NGSLYVFGGTTGYIYSTDLHKLDLNTREWTQLKPNNLSCDLPEERYRHEIAHDGQRIYILGGGTSWTAYSLNKIHAYNLETNAWEEIATKPHE-----KIGFPAARRCHSCVQIKNDVFICGGYNGEVILG---------DIWKLNLQTFQWVKL 356
The following BLAST results are available for this feature:
BLAST of TCONS_00040393-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KLD105.692e-3930.38Kelch domain-containing protein 10 OS=Homo sapiens... [more]
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