TCONS_00040326-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00040326-protein
Unique NameTCONS_00040326-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length543

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00040326-protein ID=TCONS_00040326-protein|Name=TCONS_00040326-protein|organism=Clytia hemisphaerica|type=polypeptide|length=543bp
MVVTRKPDGNPRRTVDLSPLNKFCKRETHNSEAPFHVARRVPRNTWKTVT
DAWNGFHSVPLREADRPLTTFITPFGRWRYKRLPQGFLSSGDGYNRRLDA
ILAEFERRERVVDDTLFHDESLEEHWKRTIDILSLLGEAGVVLNPQKFQF
AKRAVDFAGFRISEDRIEPLPKYFDSIKNFPTPTSTTDVRSWFGLVNQVA
NYAQLRKHLEPFRRFLSPRFQFRWTPELDAAFELSKQCIIDDIKSGVEIF
DLDKTTCVRTDWSKKGMGYFLFQKHCECDAIVPSCCEDGWRITLAGSRFL
QSSEENYAAIEGEGLAIAWSLEQSKYFTMGCNDLTVATDHEPLTKIFSDK
TSLDEITNTRLLRLKRRTLPWYFRIVHLPGKTNLAANATSRKPSGNAHDQ
VEEDRVEAFIAAAIRRDTESVISLTWDRIANATSHDPGMSALVDAILCGF
PEESRSNETVASYWIYRHGLYLTDGVVVFDDRAVIPPSLCPATLAVLHSA
HQGVSTMGARARTIIFWPGITEDIERVRQSCQDCNKNAPSNPP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_024490XLOC_024490Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00040326TCONS_00040326Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10coord: 1..81
e-value: 1.1E-13
score: 50.8
NoneNo IPR availableGENE3D3.30.70.270coord: 82..166
e-value: 1.7E-15
score: 56.5
NoneNo IPR availableGENE3D3.30.70.270coord: 167..282
e-value: 2.9E-14
score: 52.5
NoneNo IPR availableCDDcd01647RT_LTRcoord: 1..162
e-value: 2.11232E-33
score: 123.86
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 2..377
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 35..162
e-value: 4.1E-11
score: 42.7
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..162
score: 13.959

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040326-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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