TCONS_00040223-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00040223-protein
Unique NameTCONS_00040223-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length224

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00040223-protein ID=TCONS_00040223-protein|Name=TCONS_00040223-protein|organism=Clytia hemisphaerica|type=polypeptide|length=224bp
MWNWLGITNDPKIPEEGETKGESSESTESQENLTTENGDTTQPQGAEKKM
VDVAANLSSYLYTFADKATKTATKLKESVDQRLEQTIVGDFSRENEKFIH
ERDQRRVGDAVPPWVGFHEEAVMKSQILALSADERNFLRDPPSGVDFQFN
LEHMMPVALAVLKDDEELERMRFTVVPKRIKEDRFWRNYFYRVSLIKQST
QLSSLSLNKGMSKYFCVNILRYQL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_024407XLOC_024407Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00040223TCONS_00040223Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005607BSD_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005607BSD domainSMARTSM00751wurzfinal6coord: 145..197
e-value: 6.3E-12
score: 55.6
IPR005607BSD domainPFAMPF03909BSDcoord: 146..200
e-value: 1.3E-13
score: 50.7
IPR005607BSD domainGENE3D1.10.3970.10coord: 113..206
e-value: 4.3E-26
score: 90.9
IPR005607BSD domainPROSITEPS50858BSDcoord: 141..197
score: 13.788
IPR005607BSD domainSUPERFAMILY140383BSD domain-likecoord: 124..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..46

Blast
[Close]
BLAST of TCONS_00040223-protein vs. Swiss-Prot (Human)
Match: SYAP1 (Synapse-associated protein 1 OS=Homo sapiens GN=SYAP1 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.529e-53
Identity = 90/210 (42.86%), Postives = 130/210 (61.90%), Query Frame = 0 
Query:    3 NWLGITNDPKIPEEGETKGESSESTESQENLTTENGDTTQPQGAEKKMVDVAANLSSYLYTFADKATK--------TATKLKESV-----DQRLEQTIVGDFSRENEKFIHERDQRRVGDAVPPWVGFHEEAVMKSQILALSADERNFLRDPPSGVDFQFNLEHMMPVALAVLKDDEELERMRFTVVPKRIKEDRFWRNYFYRVSLIKQS 199
            +WLG+      P  G  +       E       E+ +    Q  +++++  A +  +YL+ FA  ATK        TA  +K+SV     D  +++TI+GDF +E +KF+ E+  ++   AVPPWV  ++E  ++ QILALSAD+RNFLRDPP+GV F F+ + M PVAL +L++DE L +MRF +VPK +KE+ FWRNYFYRVSLIKQS
Sbjct:    7 SWLGLQQ----PVAGGGQPNGDAPPEQPSETVAESAEEELQQAGDQELLHQAKDFGNYLFNFASAATKKITESVAETAQTIKKSVEEGKIDGIIDKTIIGDFQKEQKKFVEEQHTKKSEAAVPPWVDTNDEETIQQQILALSADKRNFLRDPPAGVQFNFDFDQMYPVALVMLQEDELLSKMRFALVPKLVKEEVFWRNYFYRVSLIKQS 212
The following BLAST results are available for this feature:
BLAST of TCONS_00040223-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SYAP12.529e-5342.86Synapse-associated protein 1 OS=Homo sapiens GN=SY... [more]
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