TCONS_00039898-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00039898-protein
Unique NameTCONS_00039898-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length108

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00039898-protein ID=TCONS_00039898-protein|Name=TCONS_00039898-protein|organism=Clytia hemisphaerica|type=polypeptide|length=108bp
KVTTANENREKEAETAHPENEKESLQEREEIKQLSTKPIEKNTKSSEKRT
RNKKHAFTTEEDNFLLKGIKKYGQGKWSNILKDPEYKFHPSRKNSTLLMR
AKAKKFID
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_024150XLOC_024150Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00039898TCONS_00039898Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015195SLIDE
IPR009057Homeobox-like
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO:0016818hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006338chromatin remodeling
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006338 chromatin remodeling
cellular_component GO:0005634 nucleus
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.60coord: 44..104
e-value: 3.1E-10
score: 39.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..58
NoneNo IPR availableCDDcd11660SANT_TRFcoord: 57..94
e-value: 7.43859E-8
score: 43.7099
IPR015195SLIDE domainPFAMPF09111SLIDEcoord: 19..83
e-value: 1.5E-6
score: 28.1
IPR009057Homeobox domain-likeSUPERFAMILY46689Homeodomain-likecoord: 51..100

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039898-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top