TCONS_00039832-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00039832-protein
Unique NameTCONS_00039832-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length246

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00039832-protein ID=TCONS_00039832-protein|Name=TCONS_00039832-protein|organism=Clytia hemisphaerica|type=polypeptide|length=246bp
KIAMKKANENWGQLSDIEKKSYEEEAASIVVAGFDDLPVEEQKARINEIR
KKMNIMCQELESYGVEILVMNYDLNDERAMKEGVNSFGSNRSADFLEAND
RLEWRFAQFMDEVTSKAVQIMQEPFPKERKLVADMLNSKIRLLKIGRTTV
PYKAIADGIVEVHGLPEGFQFRNPTLLSKSELTTIKDNIDNISFVFPKPS
CQTEDLTESNAVNETLXRKNKIVGILITFFEKYISRIRYHRSFVCA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_024108XLOC_024108Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00039832TCONS_00039832Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004212GTF2I
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 39..59
IPR004212GTF2I-like repeatGENE3D3.90.1460.10coord: 127..203
e-value: 4.8E-10
score: 38.8
IPR004212GTF2I-like repeatPFAMPF02946GTF2Icoord: 148..195
e-value: 1.2E-7
score: 31.6
IPR004212GTF2I-like repeatPROSITEPS51139GTF2Icoord: 115..209
score: 9.832
IPR004212GTF2I-like repeatSUPERFAMILY117773GTF2I-like repeatcoord: 148..208

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039832-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top