TCONS_00039796-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00039796-protein
Unique NameTCONS_00039796-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length239

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00039796-protein ID=TCONS_00039796-protein|Name=TCONS_00039796-protein|organism=Clytia hemisphaerica|type=polypeptide|length=239bp
MYAAKINQRFRSLNANARAAVREELQERVRSNHQFVIRQNSSLSWFTPRW
YLWFMYHTMQGELNLMGYGSRPLPFGGFVNNPHYQELFARAGSIVEREHQ
RILRRVRRRGTVRVDLTRFISWTDEQFIMRPLARRTGNGADGLSRNRVIR
DWTRGTNVSLRNTNDERATNEPCCAVCMDQIGNSDMQTSCCGQPAFCRNC
LGIYMDLSSDSTYPVAKRCPLCNREWPDGPIMVPRQEQQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_024078XLOC_024078Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00039796TCONS_00039796Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 174..222
e-value: 0.0077
score: 25.4
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 174..223
score: 10.026
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 173..226
e-value: 0.00677077
score: 32.4176
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 151..230
e-value: 6.0E-8
score: 31.5
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 162..228

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039796-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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