TCONS_00039591-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00039591-protein
Unique NameTCONS_00039591-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length194

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00039591-protein ID=TCONS_00039591-protein|Name=TCONS_00039591-protein|organism=Clytia hemisphaerica|type=polypeptide|length=194bp
MKDPPQITVKNTAVEDEYDGSTVALNSINDEVKSRLITLQVSKDHLSLFS
MGSKKVLFEKRIQNISFCTKGELRKDHFGFICREAGNHICYIFQGESEYK
VDEIMSAMKTAFTEALQASANSTLCETCPIQNLHKLCNNLEGVTTIAEKD
TMVHETIKILSDYEQLHVLNEVNVRLRSLFHSKIILYLFELTYC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_023908XLOC_023908Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00039591TCONS_00039591Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006020PTB/PI_dom
IPR011993PH_dom-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006020PTB/PI domainSMARTSM00462PTB_9coord: 2..125
e-value: 6.0E-7
score: 39.1
IPR006020PTB/PI domainPFAMPF00640PIDcoord: 27..119
e-value: 2.7E-10
score: 40.3
IPR006020PTB/PI domainPROSITEPS01179PIDcoord: 37..117
score: 10.808
IPR011993PH domain-likeGENE3D2.30.29.30coord: 9..126
e-value: 3.8E-22
score: 78.0
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 26..117

Blast
[Close]
BLAST of TCONS_00039591-protein vs. Swiss-Prot (Human)
Match: TBCD4 (TBC1 domain family member 4 OS=Homo sapiens GN=TBC1D4 PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 1.520e-26
Identity = 58/153 (37.91%), Postives = 86/153 (56.21%), Query Frame = 0 
Query:   29 NDEVKSRLITLQVSKDHLSLFSMGSKKVLFEKRIQNISFCTKGELRKDHFGFICREA-----GNHICYIFQGESEYKVDEIMSAMKTAFTEALQASANST---LCETCPIQNLHKLCNNLEGVTTIAEKDTMVHETIKILSDYEQLHVLNEVN 173
            +D  K+R +  QV +  ++L S  +K V+ EK  ++IS C++G    DHFGFICRE+       +ICY+FQ  SE  VDE+M  +K AF+ A    +  T   LCE CP+ +LHKLC  +EG+     K  ++   +  L+D EQ  +   V 
Sbjct:  349 SDSEKNRTMLFQVGRFEINLISPDTKSVVLEKNFKDISSCSQGIKHVDHFGFICRESPEPGLSQYICYVFQCASESLVDEVMLTLKQAFSTAAALQSAKTQIKLCEACPMHSLHKLCERIEGLYPPRAK-LVIQRHLSSLTDNEQADIFERVQ 500
The following BLAST results are available for this feature:
BLAST of TCONS_00039591-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBCD41.520e-2637.91TBC1 domain family member 4 OS=Homo sapiens GN=TBC... [more]
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