TCONS_00039559-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00039559-protein
Unique NameTCONS_00039559-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length254

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00039559-protein ID=TCONS_00039559-protein|Name=TCONS_00039559-protein|organism=Clytia hemisphaerica|type=polypeptide|length=254bp
CGKSFGQKKNLTSHQRTVHQGIKAFKCQECGKSFGHKSALTLHQRTVHEG
IKTFECQECGLLFGRNYDLKRHHKIVHEGIKAFECQECGKSFRQKKNLNS
HQRTVHGGIGPFKCQECGNSFGRKSALTLHQRTVHEGIKAFECQECGLLF
GRNYDLKRHHRIIHEGIKAFECQECGKSFGQKTNLTSHQRTVHKGLNCRK
CGKSFRQKTTITSHKNLTWQSTVHRGIKCFKCQECGKYFLGKEIELLIND
LPIK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_023897XLOC_023897Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00039559TCONS_00039559Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 170..193
e-value: 2.5E-4
score: 30.4
coord: 83..106
e-value: 1.1E-4
score: 31.6
coord: 54..77
e-value: 0.053
score: 22.7
coord: 112..135
e-value: 0.0011
score: 28.3
coord: 1..19
e-value: 67.0
score: 6.0
coord: 141..164
e-value: 0.042
score: 23.0
coord: 25..48
e-value: 1.8E-4
score: 30.9
coord: 196..224
e-value: 48.0
score: 7.2
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 56..77
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 143..164
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 172..193
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 27..48
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 114..135
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 85..106
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 25..53
score: 15.189
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 141..169
score: 13.173
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 170..198
score: 14.524
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 54..82
score: 12.902
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 196..229
score: 10.845
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 112..140
score: 14.544
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 1..24
score: 11.593
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 83..111
score: 15.48
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 91..150
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 178..239
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 1..46
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 33..92
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 139..191
NoneNo IPR availableGENE3D3.30.160.60coord: 154..178
e-value: 7.7E-17
score: 60.9
coord: 96..121
e-value: 2.4E-18
score: 65.7
NoneNo IPR availableGENE3D3.30.160.60coord: 227..242
e-value: 0.042
score: 13.4
NoneNo IPR availableGENE3D3.30.160.60coord: 36..63
e-value: 7.9E-16
score: 57.4
NoneNo IPR availableGENE3D3.30.160.60coord: 15..35
e-value: 2.9E-15
score: 55.5
NoneNo IPR availableGENE3D3.30.160.60coord: 1..14
e-value: 3.0E-5
score: 23.6
NoneNo IPR availableGENE3D2.20.28.10coord: 179..206
e-value: 7.3E-13
score: 48.1
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 1..19
e-value: 8.1E-4
score: 19.6
coord: 112..135
e-value: 2.5E-5
score: 24.4
coord: 83..106
e-value: 2.9E-7
score: 30.5
coord: 25..48
e-value: 3.9E-6
score: 26.9
coord: 170..193
e-value: 1.1E-6
score: 28.6
NoneNo IPR availableGENE3D2.10.69.10coord: 122..153
e-value: 9.7E-17
score: 60.5
coord: 64..95
e-value: 3.1E-17
score: 62.0
NoneNo IPR availablePFAMPF16622zf-C2H2_11coord: 141..164
e-value: 3.6E-4
score: 20.1
coord: 53..77
e-value: 1.7E-4
score: 21.2
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 207..226
e-value: 1.4E-6
score: 27.7

Blast
BLAST of TCONS_00039559-protein vs. Swiss-Prot (Human)
Match: ZN33A (Zinc finger protein 33A OS=Homo sapiens GN=ZNF33A PE=1 SV=3)

HSP 1 Score: 207.994 bits (528), Expect = 4.278e-62
Identity = 124/244 (50.82%), Postives = 151/244 (61.89%), Query Frame = 0
Query:    1 CGKSFGQKKNLTSHQRTVHQGIKAFKCQECGKSFGHKSALTLHQRTVHEGIKTFECQECGLLFGRNYDLKRHHKIVHEGIKAFECQECGKSFRQKKNLNSHQRTVHGGIGPFKCQECGNSFGRKSALTLHQRTVHEGIKAFECQECGLLFGRNYDLKRHHRIIHEGIKAFECQECGKSFGQKTNLTSHQR--TVHKGLNCRKCGKSFRQKTTITSHKNLTWQSTVHRGIKCFKCQECGKYFLGK 242
            C K+F  K NLT HQR+ H G K F+C ECGK+F HKSALTLHQRT H G K ++C  CG  F +  DL +H +  H G+K +EC ECGKSFR   +L  HQRT H G  PF+C ECG SF  KS LT HQR +H G K++EC  CG  F     L R H+IIH G K +EC ECGK+F  K++LT HQR  T  K   C +CGK F  K+T++ H         H G K ++C ECGK F  K
Sbjct:  361 CEKAFWDKSNLTKHQRS-HTGEKPFECNECGKAFSHKSALTLHQRT-HTGEKPYQCNACGKTFCQKSDLTKHQR-THTGLKPYECYECGKSFRVTSHLKVHQRT-HTGEKPFECLECGKSFSEKSNLTQHQR-IHIGDKSYECNACGKTFYHKSLLTR-HQIIHTGWKPYECYECGKTFCLKSDLTVHQRTHTGQKPFACPECGKFFSHKSTLSQHYR------THTGEKPYECHECGKIFYNK 592          

HSP 2 Score: 186.422 bits (472), Expect = 3.018e-54
Identity = 118/242 (48.76%), Postives = 143/242 (59.09%), Query Frame = 0
Query:    1 CGKSFGQKKNLTSHQRTVHQGIKAFKCQECGKSFGHKSALTLHQRTVHEGIKTFECQECGLLFGRNYDLKRHHKIVHEGIKAFECQECGKSFRQKKNLNSHQRTVHGGIGPFKCQECGNSFGRKSALTLHQRTVHEGIKAFECQECGLLFGRNYDLKRHHRIIHEGIKAFECQECGKSFGQKTNLTSHQRTVH---KGLNCRKCGKSFRQKTTITSHKNLTWQSTVHRGIKCFKCQECGKYF 239
            CGKSF    +L  HQRT H G K F+C ECGKSF  KS LT HQR +H G K++EC  CG  F     L RH +I+H G K +EC ECGK+F  K +L  HQRT H G  PF C ECG  F  KS L+ H RT H G K +EC ECG +F     L +H+R  H G K +EC ECGK+F QK+ LT HQR +H   K   C +CGK+F  K+ +  H+        H   K +KC ECGK F
Sbjct:  445 CGKSFRVTSHLKVHQRT-HTGEKPFECLECGKSFSEKSNLTQHQR-IHIGDKSYECNACGKTFYHKSLLTRH-QIIHTGWKPYECYECGKTFCLKSDLTVHQRT-HTGQKPFACPECGKFFSHKSTLSQHYRT-HTGEKPYECHECGKIFYNKSYLTKHNRT-HTGEKPYECNECGKAFYQKSQLTQHQR-IHIGEKPYKCNECGKAFCHKSALIVHQR------THTQEKPYKCNECGKSF 673          

HSP 3 Score: 184.111 bits (466), Expect = 2.217e-53
Identity = 115/241 (47.72%), Postives = 141/241 (58.51%), Query Frame = 0
Query:    1 CGKSFGQKKNLTSHQRTVHQGIKAFKCQECGKSFGHKSALTLHQRTVHEGIKTFECQECGLLFGRNYDLKRHHKIVHEGIKAFECQECGKSFRQKKNLNSHQRTVHGGIGPFKCQECGNSFGRKSALTLHQRTVHEGIKAFECQECGLLFGRNYDLKRHHRIIHEGIKAFECQECGKSFGQKTNLTSHQRT--VHKGLNCRKCGKSFRQKTTITSHKNLTWQSTVHRGIKCFKCQECGKYF 239
            CGKSF +K NLT HQR +H G K+++C  CGK+F HKS LT HQ  +H G K +EC ECG  F    DL  H +  H G K F C ECGK F  K  L+ H RT H G  P++C ECG  F  KS LT H RT H G K +EC ECG  F +   L +H RI H G K ++C ECGK+F  K+ L  HQRT    K   C +CGKSF  K+ +  H+        H G K ++C ECGK+F
Sbjct:  473 CGKSFSEKSNLTQHQR-IHIGDKSYECNACGKTFYHKSLLTRHQ-IIHTGWKPYECYECGKTFCLKSDLTVHQR-THTGQKPFACPECGKFFSHKSTLSQHYRT-HTGEKPYECHECGKIFYNKSYLTKHNRT-HTGEKPYECNECGKAFYQKSQLTQHQRI-HIGEKPYKCNECGKAFCHKSALIVHQRTHTQEKPYKCNECGKSFCVKSGLIFHER------KHTGEKPYECNECGKFF 701          

HSP 4 Score: 180.259 bits (456), Expect = 5.541e-52
Identity = 116/241 (48.13%), Postives = 143/241 (59.34%), Query Frame = 0
Query:    2 GKSFGQKKNLTSHQRTVHQGIKAFKCQECGKSFGHKSALTLHQRTVHEGIKTFECQECGLLFGRNYDLKRHHKIVHEGIKAFECQECGKSFRQKKNLNSHQRTVHGGIGPFKCQECGNSFGRKSALTLHQRTVHEGIKAFECQECGLLFGRNYDLKRHHRIIHEGIKAFECQECGKSFGQKTNLTSHQRTVH---KGLNCRKCGKSFRQKTTITSHKNLTWQSTVHRGIKCFKCQECGKYF 239
            G +F +K  L SH +   +G K F+C ECGK+F  KS LT HQR VH G K F+C EC   F    +L +H +  H G K FEC ECGK+F  K  L  HQRT H G  P++C  CG +F +KS LT HQRT H G+K +EC ECG  F     LK H R  H G K FEC ECGKSF +K+NLT HQR +H   K   C  CGK+F  K+ +T H+       +H G K ++C ECGK F
Sbjct:  306 GNNFRRKLCL-SHLQKGDKGEKHFECNECGKAFWEKSHLTRHQR-VHTGQKPFQCNECEKAFWDKSNLTKHQR-SHTGEKPFECNECGKAFSHKSALTLHQRT-HTGEKPYQCNACGKTFCQKSDLTKHQRT-HTGLKPYECYECGKSFRVTSHLKVHQR-THTGEKPFECLECGKSFSEKSNLTQHQR-IHIGDKSYECNACGKTFYHKSLLTRHQ------IIHTGWKPYECYECGKTF 533          

HSP 5 Score: 176.792 bits (447), Expect = 9.390e-51
Identity = 118/266 (44.36%), Postives = 148/266 (55.64%), Query Frame = 0
Query:    1 CGKSFGQKKNLTSHQRTVHQGIKAFKCQECGKSFGHKSALTLHQRTVHEGIKTFECQECGLLFGRNYDLKRHHKIVHEGIKAFECQECGKSFRQKKNLNSHQRTVHGGIGPFKCQECGNSFGRKSALTLHQRTVHEGIKAFECQECGLLFGRNYDLKRHHRIIHEGIKAFECQECGKSFGQKTNLTSHQR--TVHKGLNCRKCGKSFRQKTTITSHKNLTWQSTVHRGIKCFKCQECGKYFLGKEI----------ELLINDLPIK 254
            CGK+F  K +LT HQRT H G K F C ECGK F HKS L+ H RT H G K +EC ECG +F     L +H++  H G K +EC ECGK+F QK  L  HQR +H G  P+KC ECG +F  KSAL +HQRT H   K ++C ECG  F     L  H R  H G K +EC ECGK F  K++LT H R  T  K   C +CGK F +K+ +  H+        H G K ++C  C K F  K            E L+N++ I+
Sbjct:  529 CGKTFCLKSDLTVHQRT-HTGQKPFACPECGKFFSHKSTLSQHYRT-HTGEKPYECHECGKIFYNKSYLTKHNR-THTGEKPYECNECGKAFYQKSQLTQHQR-IHIGEKPYKCNECGKAFCHKSALIVHQRT-HTQEKPYKCNECGKSFCVKSGLIFHERK-HTGEKPYECNECGKFFRHKSSLTVHHRAHTGEKSCQCNECGKIFYRKSELAQHQR------SHTGEKPYECNTCRKTFSQKSNLIVHQRRHIGENLMNEMDIR 782          

HSP 6 Score: 164.081 bits (414), Expect = 3.726e-46
Identity = 101/226 (44.69%), Postives = 130/226 (57.52%), Query Frame = 0
Query:   21 GIKAFKCQECGKSFGHKSALTLHQRTVHEGIKTFECQECGLLFGRNYDLKRHHKIVHEGIKAFECQECGKSFRQKKNLNSHQRTVHGGIGPFKCQECGNSFGRKSALTLHQRTVHEGIKAFECQECGLLFGRNYDLKRHHRIIHEGIKAFECQECGKSFGQKTNLTSHQRT--VHKGLNCRKCGKSFRQKTTITSHKNLTWQSTVHRGIKCFKCQECGKYFLGKEI 244
             +K + C E G +F  K  L+ H +   +G K FEC ECG  F     L RH + VH G K F+C EC K+F  K NL  HQR+ H G  PF+C ECG +F  KSALTLHQRT H G K ++C  CG  F +  DL +H R  H G+K +EC ECGKSF   ++L  HQRT    K   C +CGKSF +K+ +T H+       +H G K ++C  CGK F  K +
Sbjct:  296 SMKHYDCGESGNNFRRKLCLS-HLQKGDKGEKHFECNECGKAFWEKSHLTRHQR-VHTGQKPFQCNECEKAFWDKSNLTKHQRS-HTGEKPFECNECGKAFSHKSALTLHQRT-HTGEKPYQCNACGKTFCQKSDLTKHQRT-HTGLKPYECYECGKSFRVTSHLKVHQRTHTGEKPFECLECGKSFSEKSNLTQHQR------IHIGDKSYECNACGKTFYHKSL 510          

HSP 7 Score: 90.8929 bits (224), Expect = 8.548e-21
Identity = 70/190 (36.84%), Postives = 91/190 (47.89%), Query Frame = 0
Query:   56 CQECGLLFGRNYDLKRHHKIVHEGIKAFECQECGKSFRQKKNLNSHQRTVHG-GIGPFKCQECGNSFGRKSALTLHQRTVHEGIKAFECQECGLLFGRNYDLKRHHRIIHEGIKAFECQECGKSFGQKTNLTSHQR--TVHKGLNCRKCGKSFRQKTTITSHKNLTWQSTVHRGIKCFKCQECGKYFLGK 242
            C    LLF         H+I       +E  +C K    K  L+      HG  +  + C E GN+F RK  L+ H +   +G K FEC ECG  F     L RH R+ H G K F+C EC K+F  K+NLT HQR  T  K   C +CGK+F  K+ +T H+        H G K ++C  CGK F  K
Sbjct:  256 CDSSSLLF---------HQISPSRDNHYEFSDCEKFLCVKSTLSK----PHGVSMKHYDCGESGNNFRRKLCLS-HLQKGDKGEKHFECNECGKAFWEKSHLTRHQRV-HTGQKPFQCNECEKAFWDKSNLTKHQRSHTGEKPFECNECGKAFSHKSALTLHQR------THTGEKPYQCNACGKTFCQK 424          
The following BLAST results are available for this feature:
BLAST of TCONS_00039559-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN33A4.278e-6250.82Zinc finger protein 33A OS=Homo sapiens GN=ZNF33A ... [more]
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