TCONS_00039553-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00039553-protein
Unique NameTCONS_00039553-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length246

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00039553-protein ID=TCONS_00039553-protein|Name=TCONS_00039553-protein|organism=Clytia hemisphaerica|type=polypeptide|length=246bp
MDLSKGKMRIISVGPTGVGKSTIGNKLLGLSPNDFRYLKAEASSMSCTQV
PVTVQKGNVMYTDVPGLPDTNPDKTKIVYDVIIEEAKKPLTAIFFVFAVD
MRMDKATKDRIRNCSLLFNEINRCSAAKILILNDIRSWSNPNCLDEKSEE
YKTEKAIYDQVRLDAQKHYEQDIKNTTGIEFYCTKVINGINKKINPDNNM
NVVLHYLELTLQSFPCEASPHLRNFKMLEKVVTNARENCDFEQQLI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_023893XLOC_023893Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00039553TCONS_00039553Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006703G_AIG1
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006703AIG1-type guanine nucleotide-binding (G) domainPFAMPF04548AIG1coord: 9..120
e-value: 2.6E-9
score: 36.6
NoneNo IPR availableGENE3D3.40.50.300coord: 2..244
e-value: 1.2E-15
score: 56.9
NoneNo IPR availableCDDcd00882Ras_like_GTPasecoord: 13..135
e-value: 4.15908E-7
score: 46.2956
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 6..158

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039553-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top