TCONS_00039449-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00039449-protein
Unique NameTCONS_00039449-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length306

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00039449-protein ID=TCONS_00039449-protein|Name=TCONS_00039449-protein|organism=Clytia hemisphaerica|type=polypeptide|length=306bp
ESFTEAIDKNNSIPPIQKMNYLIGFVTGEAESLLKGLRLSGDNYKKALEL
LKERFGNSQILKTVHMNRIIELESVCDISEVKELRKLYDSVETEIRNLES
LSMKHDEYGPLLVPLLINKVPNELKLILSREKEFDLENILKSFKNELEAR
EKVSLTMTSKENDKRSTASSLYTGSESKNISRNCVFCNRSGHKEQNCSFI
KNVNERKRILQIERRCFVCLKTGHSANNCKANFNCFSCKGRHHVSICFKQ
KDKGDRNGRYHRNDNNNKVKERDTKSEDKGKERDTKTDSKGESTHNKEKD
ESDNIT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_023807XLOC_023807Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00039449TCONS_00039449Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR005312DUF1759
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 81..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 255..306
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 183..199
e-value: 7.6
score: 5.8
coord: 215..231
e-value: 0.013
score: 22.9
IPR001878Zinc finger, CCHC-typeGENE3D4.10.60.10coord: 222..257
e-value: 0.0058
score: 16.1
IPR001878Zinc finger, CCHC-typeGENE3D4.10.60.10coord: 170..221
e-value: 9.1E-6
score: 24.9
IPR005312Protein of unknown function DUF1759PFAMPF03564DUF1759coord: 1..133
e-value: 4.5E-29
score: 101.2

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039449-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top