TCONS_00039213-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00039213-protein
Unique NameTCONS_00039213-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length162

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00039213-protein ID=TCONS_00039213-protein|Name=TCONS_00039213-protein|organism=Clytia hemisphaerica|type=polypeptide|length=162bp
PYKIAKEKLSLREEILGDRFYIKHSDYNGYYLDEDHQYYYQVQLEMLATS
TTFCDFFVWTPTEFLTVRIYIDREFLGKVLQQCDIFWQHVILKELLTRRF
ESEVICDDIPEDGEKCSVCSDDNNYMMKCKTCLRFFHPKCAGRKTMAKPG
TWNCKQCRKNKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_023624XLOC_023624Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00039213TCONS_00039213Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR011604Exonuc_phg/RecB_C
IPR019786Zinc_finger_PHD-type_CS
IPR019787Znf_PHD-finger
IPR011335Restrct_endonuc-II-like
IPR011011Znf_FYVE_PHD
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
GO:0003677DNA binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
molecular_function GO:0004518 nuclease activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 115..158
e-value: 4.6E-6
score: 36.2
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 105..162
e-value: 1.5E-9
score: 37.0
IPR011604Exonuclease, phage-type/RecB, C-terminalGENE3D3.90.320.10coord: 13..103
e-value: 3.0E-13
score: 49.0
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 116..157
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 113..160
score: 9.445
NoneNo IPR availableCDDcd15489PHD_SFcoord: 116..157
e-value: 6.09995E-4
score: 34.215
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 35..91
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 109..160

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039213-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top