TCONS_00039199-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00039199-protein
Unique NameTCONS_00039199-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length252

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00039199-protein ID=TCONS_00039199-protein|Name=TCONS_00039199-protein|organism=Clytia hemisphaerica|type=polypeptide|length=252bp
GFTANDLDKLPIGYQIPIKEIFHNNTRSTNQIAMSLETAMFLGREDIVSL
KQLELKENTKLSSKLKPSHDEDDKDGMLIDEQIFELRFKDDLRVHEVKRL
LNSSDHVTVSVEQKPDMNDHAFAKEEESKLLILSKRTMSLSVARGMLTLG
TAEPKSSKAVIIPTLDLSGRSSTSSKTIQIPQSDLNALLLWPNFHNGVAA
GLKVARENCKVDSNWILLNKMKYSKLNASHSGFLFALGLMGHFVVTSQTS
PP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_023616XLOC_023616Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00039199TCONS_00039199Clytia hemisphaericatranscript
Blast
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BLAST of TCONS_00039199-protein vs. Swiss-Prot (Human)
Match: APC1 (Anaphase-promoting complex subunit 1 OS=Homo sapiens GN=ANAPC1 PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 4.865e-47
Identity = 95/252 (37.70%), Postives = 157/252 (62.30%), Query Frame = 0 
Query:    1 GFTANDLDKLPIGYQIPIKE-IFHNNTRSTNQIAMSLETAMFLGREDIVSLKQLE--LKENTKLSSKLKPS--HDEDDKDGML-IDEQIFELRFKDDLRVHEVKRLLNSSDHVTVSVEQKPDMNDHAFAKEEESKLLILSKRTMSLSVARGMLTLGTAEPKSSKAVIIPTLDLSGRSSTSSKTIQIPQSDLNA---LLLWPNFHNGVAAGLKVARENCKVDSNWILLNKMKYSKLNASHSGFLFALGLMGHF 243
            GFT  DL+ LP G  +PI++ I+H   +  +    ++   + +GR+D+ S +  E  L +   + S   PS    E++ DGM  ++ ++  L + +DLRV +V+RLL S+  V V+V Q P+++DH F +E+E++LL L +RTM+L V RGM TL +  P  ++ + IP L+L+GR+   + T+ +   +++    +  W +FHNGVAAGLK+A  + ++DS WI+ NK K+++L   ++GFL ALGL GH 
Sbjct:  938 GFTLRDLETLPFGIALPIRDAIYHCREQPASDWPEAV--CLLIGRQDL-SKQACEGNLPKGKSVLSSDVPSGTETEEEDDGMNDMNHEVMSLIWSEDLRVQDVRRLLQSAHPVRVNVVQYPELSDHEFIEEKENRLLQLCQRTMALPVGRGMFTLFSYHPVPTEPLPIPKLNLTGRAPPRNTTVDLNSGNIDVPPNMTSWASFHNGVAAGLKIAPAS-QIDSAWIVYNKPKHAELANEYAGFLMALGLNGHL 1185
The following BLAST results are available for this feature:
BLAST of TCONS_00039199-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
APC14.865e-4737.70Anaphase-promoting complex subunit 1 OS=Homo sapie... [more]
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