TCONS_00039170-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00039170-protein
Unique NameTCONS_00039170-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length243

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00039170-protein ID=TCONS_00039170-protein|Name=TCONS_00039170-protein|organism=Clytia hemisphaerica|type=polypeptide|length=243bp
MKEQIQEMESELERFHKQNTGLELNIAELRLKLKATEKELYGERQTVHDK
QALVKRFKTDLHNAAGFIQEPKKLKEHVKELYGKYVSDDTPEEASVDLDI
QKEYARQREHLERSVASLRKKLAKDTEIHRADNVRIMQENVYLIKEINDL
RRELKNARTQVHDLEASINVMRKHQNAGGMSTTSLLERRDSSDEGNKTTE
LNKMIDLQKTEMRRLRAQIVDMESKIAERPSSGGGRLPPLPVQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_023594XLOC_023594Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00039170TCONS_00039170Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 140..174
NoneNo IPR availableCOILSCoilCoilcoord: 101..121
NoneNo IPR availableCOILSCoilCoilcoord: 205..225
NoneNo IPR availableCOILSCoilCoilcoord: 5..39
NoneNo IPR availableGENE3D1.10.287.510coord: 136..230
e-value: 0.0018
score: 18.0
NoneNo IPR availableGENE3D1.20.5.170coord: 1..127
e-value: 0.0038
score: 16.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..243
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..201

Blast
[Close]
BLAST of TCONS_00039170-protein vs. Swiss-Prot (Human)
Match: CFA57 (Cilia- and flagella-associated protein 57 OS=Homo sapiens GN=CFAP57 PE=2 SV=3)

HSP 1 Score: 224.942 bits (572), Expect = 2.015e-67
Identity = 127/243 (52.26%), Postives = 170/243 (69.96%), Query Frame = 0 
Query:    1 MKEQIQEMESELERFHKQNTGLELNIAELRLKLKATEKELYGERQTVHDKQALVKRFKTDLHNAAGFIQEPKKLKEHVKELYGKYVS-DDTPEEASVDLDIQKEYARQREHLERSVASLRKKLAKDTEIHRADNVRIMQENVYLIKEINDLRRELKNARTQVHDLEASINVMRK--HQNAGGMSTTSLLERRDSSDEGNKTTELNKMIDLQKTEMRRLRAQIVDMESKIAERPSSGGGRLPPL 240
            MKEQIQEME+ELE FHKQNT LELNI EL  KL+AT++E+  ERQ   D +ALVKRFKTDLHN   +IQEP+ LKE V+ L+ KYV   D  E A ++ D+Q+EY RQREHLER++A+L+KK+ K+ E+HR D VRIMQENV LIKEIN+LRRELK  R+QV+DLEA++ + +K   Q       +  +     +   N+  E  ++I++Q+ E++RLR QI + E ++    +  G RLP L
Sbjct:  997 MKEQIQEMEAELENFHKQNTQLELNITELWQKLRATDQEMRRERQKERDLEALVKRFKTDLHNCVAYIQEPRLLKEKVRGLFEKYVQRADMVEIAGLNTDLQQEYTRQREHLERNLATLKKKVVKEGELHRTDYVRIMQENVSLIKEINELRRELKFTRSQVYDLEAALKLTKKVRPQEVSETEPSRDMLSTAPTARLNEQEETGRIIEMQRLEIQRLRDQIQEQE-QVTGFHTLAGVRLPSL 1238
The following BLAST results are available for this feature:
BLAST of TCONS_00039170-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CFA572.015e-6752.26Cilia- and flagella-associated protein 57 OS=Homo ... [more]
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