TCONS_00038982-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00038982-protein
Unique NameTCONS_00038982-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length294

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00038982-protein ID=TCONS_00038982-protein|Name=TCONS_00038982-protein|organism=Clytia hemisphaerica|type=polypeptide|length=294bp
MFIGDKVQDPMIHMCEKCSLPILIYGRLNPCKHVFCLSCAEISNGVCPRC
DDRVDRIEPAGIGQIFVCSYGGSRNGTSGCRRSYLSQRDLIAHIKHRHEK
EGSNLPEAELIRQQGAAALRMPYFANAQAVTGGSSAPGSNLIINPIPTSN
PAAVSGIQNTMVIQPGSQQIYVDPNRLSLLQTATGAQVQIQQIPQGMTIA
TATAQQPYTQGGASAATAAFLAASQPQQQYAPQQIPSTGGPPSNNTPGRQ
PPGDPRLNPNQQMNIHGTQQNDWRNQTQSSDWSSRSSSQQSFYK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_023439XLOC_023439Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00038982TCONS_00038982Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
IPR001841Znf_RING
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 12..66
e-value: 1.1E-4
score: 21.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 224..294
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 13..55
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 31..40
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 15..51
score: 8.845
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 14..50
e-value: 3.75832E-4
score: 36.2696

Blast
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BLAST of TCONS_00038982-protein vs. Swiss-Prot (Human)
Match: HAKAI (E3 ubiquitin-protein ligase Hakai OS=Homo sapiens GN=CBLL1 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.565e-27
Identity = 54/113 (47.79%), Postives = 68/113 (60.18%), Query Frame = 0 
Query:    2 FIGDKVQDPMIHMCEKCSLPILIYGRLNPCKHVFCLSCAEIS----NGVCPRCDDRVDRIEPAGIGQIFVCSYGGSRNGTSGCRRSYLSQRDLIAHIKHRHEKEGSNLPEAEL 110
             +G+K   P +H C+KC LPI IYGR+ PCKHVFC  CA +     + +CP C D V RIE    G +F+CS         GC+R+YLSQRDL AHI HRH + G  +  A L
Sbjct:   97 ILGEKDDTP-VHFCDKCGLPIKIYGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQRIEQCTRGSLFMCSI------VQGCKRTYLSQRDLQAHINHRHMRAGKPVTRASL 202
The following BLAST results are available for this feature:
BLAST of TCONS_00038982-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HAKAI7.565e-2747.79E3 ubiquitin-protein ligase Hakai OS=Homo sapiens ... [more]
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