TCONS_00038867-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00038867-protein
Unique NameTCONS_00038867-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length132

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00038867-protein ID=TCONS_00038867-protein|Name=TCONS_00038867-protein|organism=Clytia hemisphaerica|type=polypeptide|length=132bp
IGDRHFKECAWRLSTHTDTGLLKDCKFNKSKTDSYLMVSITSNIRQGKAQ
ACSRWFVTFDGNECSPYPIDHVYYRNTANDDYIPFTMKGVCKINKSGVVS
VGFNVGKCSGFDSLGDVYTGWNQVTRIVIEEL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_023343XLOC_023343Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00038867TCONS_00038867Clytia hemisphaericatranscript
Blast
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BLAST of TCONS_00038867-protein vs. Swiss-Prot (Human)
Match: CTHR1 (Collagen triple helix repeat-containing protein 1 OS=Homo sapiens GN=CTHRC1 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 7.833e-22
Identity = 48/138 (34.78%), Postives = 81/138 (58.70%), Query Frame = 0 
Query:    5 HFKECAWR-LSTHTDTGLLKDCKFNKSKTDSYLMVSITSNIR-QGKAQACSRWFVTFDGNECS-PYPIDHVYYRNTANDD-------YIPFTMKGVCKINKSGVVSVGFNVGKCSGFDSLGDVYTGWNQVTRIVIEEL 132
            ++K+C+W  L+   D G + +C F K +++S L V  + ++R + +   C RW+ TF+G ECS P PI+ + Y +  + +       +   +++G+C+   +G+V V   VG CS +   GD  TGWN V+RI+IEEL
Sbjct:  105 NYKQCSWSSLNYGIDLGKIAECTFTKMRSNSALRVLFSGSLRLKCRNACCQRWYFTFNGAECSGPLPIEAIIYLDQGSPEMNSTINIHRTSSVEGLCEGIGAGLVDVAIWVGTCSDYPK-GDASTGWNSVSRIIIEEL 241
The following BLAST results are available for this feature:
BLAST of TCONS_00038867-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CTHR17.833e-2234.78Collagen triple helix repeat-containing protein 1 ... [more]
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