TCONS_00038596-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00038596-protein
Unique NameTCONS_00038596-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length344

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00038596-protein ID=TCONS_00038596-protein|Name=TCONS_00038596-protein|organism=Clytia hemisphaerica|type=polypeptide|length=344bp
YEPDSLRVMQSSLHRYLVEKGSTMNILKDQSFSKSRKILEGKARILRGAG
KGKKRNASSALDPDEEELLWSVGKLGDNSAISLVRTMWFVCSEHFGLRGC
QEHCTMRVEDFIFKKDKNGCDFVEFIEDPTKTRQSGLKPIQRKTNPKMYA
IGGERCPVRLLRLYLSKRPESIQESGRFYLTPKKSFNPNDDVWFMQVPMG
KNTISGIMKALTSGTELENSKKKFTNHSIRKTTVKKLKAANIPESSIIKV
TGHTTTKGLSSYDPGDENEFRSMSNALNAPSTGQDIRNNNPVYQSAFQSS
FVQNVQTPQNVFHGCTVNFNTVHQNVVKRKCKRVVIESDSSQSQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_023164XLOC_023164Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00038596TCONS_00038596Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021893DUF3504
IPR013762Integrase-like_cat
IPR011010DNA_brk_join_enz
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006310DNA recombination
GO:0015074DNA integration
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006310 DNA recombination
molecular_function GO:0003677 DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021893Protein of unknown function DUF3504PFAMPF12012DUF3504coord: 65..211
e-value: 1.7E-34
score: 119.0
IPR013762Integrase-like, catalytic domainGENE3D1.10.443.10coord: 59..274
e-value: 2.0E-9
score: 36.9
IPR011010DNA breaking-rejoining enzyme, catalytic coreSUPERFAMILY56349DNA breaking-rejoining enzymescoord: 78..272

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00038596-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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