TCONS_00037716-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00037716-protein
Unique NameTCONS_00037716-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length266

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00037716-protein ID=TCONS_00037716-protein|Name=TCONS_00037716-protein|organism=Clytia hemisphaerica|type=polypeptide|length=266bp
ERIIGIVVDEAHLVPKWGTSSKSEDAPFREAFQHLDRLRGYFSTPYLCLT
ATANKKTRNDITKILGLKQPKIIKVTPEKPNIKLRIIKVKTVEDVMNSAL
LCDLVDQLKTDPKTCDKTIIYCHSYPACGDVYLKIKGHFPRGFDLTLLVE
IYHGSTEDEIQQEILHDFSNNNSSTRIVIATNALGVGVNIRNIRNIVHWG
VPSDIEGYVQEIGRAGREEKDSSVTLFYRXNIRNIVHWGVPSDIEGYVQE
IGRAGRDEKDSSTKIW
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_022449XLOC_022449Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00037716TCONS_00037716Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 133..219
e-value: 2.2E-16
score: 70.4
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 110..217
e-value: 5.5E-17
score: 62.0
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 100..266
score: 15.961
NoneNo IPR availableGENE3D3.40.50.300coord: 79..229
e-value: 7.9E-27
score: 93.5
coord: 230..266
e-value: 5.0E-6
score: 25.6
NoneNo IPR availableGENE3D3.40.50.300coord: 4..76
e-value: 4.7E-7
score: 28.8
NoneNo IPR availableCDDcd00079HELICccoord: 103..227
e-value: 5.44707E-16
score: 70.7296
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..71
score: 9.371
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 231..259
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 6..229

Blast
[Close]
BLAST of TCONS_00037716-protein vs. Swiss-Prot (Human)
Match: WRN (Werner syndrome ATP-dependent helicase OS=Homo sapiens GN=WRN PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 2.471e-25
Identity = 76/230 (33.04%), Postives = 112/230 (48.70%), Query Frame = 0 
Query:    3 IIGIVVDEAHLVPKWGTSSKSEDAPFREAFQHLDRLRGYFS-TPYLCLTATANKKTRNDITKILGLKQPKIIKVTPEKPNIKLRIIKVKTVEDVMNSALLCDLVDQLKTDPKTCD---KTIIYCHSYPACGDVYLKIKGHFPRGFDLTLLVEIYHGSTEDEIQQEILHDFSNNNSSTRIVIATNALGVGVNIRNIRNIVHWGVPSDIEGYVQEIGRAGREEKDSSVTLFY 228
            I  I VDEAH + +WG         FR++F+ L  L+      P + LTATA+   R DI + L L+ P+I     ++PN+ L + + KT        +L DL   L       +    TIIYC S      V  +++        L L    YH       +++I H F  +    + VIAT A G+G+N  +IR ++H+G P D+E Y QEIGRAGR+   SS  + +
Sbjct:  662 ITLIAVDEAHCISEWGHD-------FRDSFRKLGSLKTALPMVPIVALTATASSSIREDIVRCLNLRNPQITCTGFDRPNLYLEV-RRKT------GNILQDLQPFLVKTSSHWEFEGPTIIYCPSRKMTQQVTGELR-------KLNLSCGTYHAGMSFSTRKDIHHRFVRDE--IQCVIATIAFGMGINKADIRQVIHYGAPKDMESYYQEIGRAGRDGLQSSCHVLW 868
The following BLAST results are available for this feature:
BLAST of TCONS_00037716-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WRN2.471e-2533.04Werner syndrome ATP-dependent helicase OS=Homo sap... [more]
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