TCONS_00037341-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00037341-protein
Unique NameTCONS_00037341-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length179

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00037341-protein ID=TCONS_00037341-protein|Name=TCONS_00037341-protein|organism=Clytia hemisphaerica|type=polypeptide|length=179bp
MSAAEPEPMETAPVEETTKPAEDKPAEQPAAEAAPTETPAVVPAAETETP
AAPADPTPAAPEKPAETETPAETPAAAPAPEKTESPAPAAVELPKVTPQP
STPVVLTENVQKIVSEEKEAATTPKNRTDIQSLPTRQYLDQSVVPILLQG
LTALSKERPSEPIDFLAAYLMKNKHMFQK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_022125XLOC_022125Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00037341TCONS_00037341Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007858Dpy-30_motif
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007858Dpy-30 motifPFAMPF05186Dpy-30coord: 134..175
e-value: 3.0E-19
score: 68.3
NoneNo IPR availableGENE3D1.20.890.10coord: 135..174
e-value: 0.0011
score: 18.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..103

Blast
[Close]
BLAST of TCONS_00037341-protein vs. Swiss-Prot (Human)
Match: DPY30 (Protein dpy-30 homolog OS=Homo sapiens GN=DPY30 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.878e-27
Identity = 48/85 (56.47%), Postives = 62/85 (72.94%), Query Frame = 0 
Query:   95 KVTPQPSTPVVLTENVQKIVSEEK-EAATTPKNRTDIQSLPTRQYLDQSVVPILLQGLTALSKERPSEPIDFLAAYLMKNKHMFQ 178
            +V   P +   LT+NV++IV  EK  A  + K + D+QSLPTR YLDQ+VVPILLQGL  L+KERP  PI+FLA+YL+KNK  F+
Sbjct:   12 QVAENPHSEYGLTDNVERIVENEKINAEKSSKQKVDLQSLPTRAYLDQTVVPILLQGLAVLAKERPPNPIEFLASYLLKNKAQFE 96
The following BLAST results are available for this feature:
BLAST of TCONS_00037341-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DPY302.878e-2756.47Protein dpy-30 homolog OS=Homo sapiens GN=DPY30 PE... [more]
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