TCONS_00036982-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00036982-protein
Unique NameTCONS_00036982-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length311

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00036982-protein ID=TCONS_00036982-protein|Name=TCONS_00036982-protein|organism=Clytia hemisphaerica|type=polypeptide|length=311bp
MQPHKILINDQEDDYEGPNIPGQSDTISTSSDHKPPSSPESATFFNSKSL
NNATIWLKTGAKSLAKKCRIVDDTDDGKTNLIQSIFNLINANLGTGILAM
PFVIRLGGYWGILITIVVGILGNYTGKMLINLLYEETADGQRVRVRDSYA
DIGEEFSPRFGRLLVHIVNCIEQFSHCVLLLIMPGTVIAHTFPKSGMSES
TWIFLLSLIIIPTILVRKMHQVTWTCIVSVCIATVISLFVLGYSLMNRPS
WDSEIMPSFNPNITPISFGIVMVTYSSQAYLPSIERCMREPESFDPLMDF
SYTVVTIFKCX
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_021850XLOC_021850Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00036982TCONS_00036982Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013057AA_transpt_TM
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013057Amino acid transporter, transmembrane domainPFAMPF01490Aa_transcoord: 78..308
e-value: 2.5E-32
score: 112.0

Blast
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BLAST of TCONS_00036982-protein vs. Swiss-Prot (Human)
Match: VIAAT (Vesicular inhibitory amino acid transporter OS=Homo sapiens GN=SLC32A1 PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 2.018e-36
Identity = 74/240 (30.83%), Postives = 133/240 (55.42%), Query Frame = 0 
Query:   75 DDGKTNLIQSIFNLINANLGTGILAMPFVIRLGGYWGILITIVVGILGNYTGKMLINLLYEETADGQRVRVRDSYADIGEE-FSPRF---GRLLVHIVNCIEQFSHCVLLLIMPGTVIAHTFPKSGMSESTWIFLLSLIIIPTILVRKMHQVTWTCIVSVCIATVISLFVLGYSLMNRPSWDSEIMPSF-NPNITPISFGIVMVTYSSQAYLPSIERCMREPESFDPLMDFSYTVVTIFK 309
            D  K    ++ +N+ NA  G  +L +P+ I  GGY G+ + I   ++  YTGK+LI  LYEE  DG+ VRVRDSY  I     +PRF   G  +V++   IE    C+L +++ G ++ ++FP   +S+ +W  + + +++P   ++ +  V+   ++      VI++ V+ Y L     W  E +  + +    PIS GI++ +Y+SQ +LPS+E  M++P  F  +M++++    + K
Sbjct:  112 DKPKITAWEAGWNVTNAIQGMFVLGLPYAILHGGYLGLFLIIFAAVVCCYTGKILIACLYEENEDGEVVRVRDSYVAIANACCAPRFPTLGGRVVNVAQIIELVMTCILYVVVSGNLMYNSFPGLPVSQKSWSIIATAVLLPCAFLKNLKAVSKFSLLCTLAHFVINILVIAYCLSRARDWAWEKVKFYIDVKKFPISIGIIVFSYTSQIFLPSLEGNMQQPSEFHCMMNWTHIAACVLK 351
The following BLAST results are available for this feature:
BLAST of TCONS_00036982-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
VIAAT2.018e-3630.83Vesicular inhibitory amino acid transporter OS=Hom... [more]
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