TCONS_00036971-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00036971-protein
Unique NameTCONS_00036971-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length282

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00036971-protein ID=TCONS_00036971-protein|Name=TCONS_00036971-protein|organism=Clytia hemisphaerica|type=polypeptide|length=282bp
KKQRNISQMMVDNSGKGFTVIATDRLKTSPNGKKNDNKGAFKCTIKTMMQ
LFNHRKQVKKRIQRVTLSVIVLGTRNVGKTSLIRALCGEEFTSDASPTVL
DVYTKENMINNMLVKFEFIDLSASHSFPAMRKLYIQKANIFFLLYDNTRD
SFKEMVRLKDEIEEIHNVHLSELPIAVIKTKCDSTRSRTLPEMEVDDISH
WCGTLFACSAKKGVNIAEIEEYLLCEGCFADTKKTTTTFERNSGHRVSGR
YIYGGRRRSKSVILNRTPERPRSSCSNSSVQS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_021840XLOC_021840Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00036971TCONS_00036971Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 90..106
score: 23.31
coord: 67..88
score: 29.04
coord: 205..227
score: 23.34
coord: 171..184
score: 26.34
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 67..230
e-value: 3.4E-6
score: -32.4
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 64..230
e-value: 2.5E-8
score: 5.7
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 69..226
e-value: 0.0095
score: -81.5
NoneNo IPR availableGENE3D3.40.50.300coord: 130..226
e-value: 7.9E-13
score: 47.7
NoneNo IPR availableGENE3D3.30.70.1390coord: 65..129
e-value: 4.9E-13
score: 48.4
NoneNo IPR availablePROSITEPS51419RABcoord: 62..279
score: 10.387
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 68..223
e-value: 5.5E-12
score: 43.7
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 69..219
e-value: 1.9E-22
score: 79.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 67..224

Blast
[Close]
BLAST of TCONS_00036971-protein vs. Swiss-Prot (Human)
Match: DIRA2 (GTP-binding protein Di-Ras2 OS=Homo sapiens GN=DIRAS2 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 4.606e-18
Identity = 50/158 (31.65%), Postives = 78/158 (49.37%), Query Frame = 0 
Query:   69 VIVLGTRNVGKTSLIRALCGEEFTSDASPTVLDVYTKENMINNMLVKFEFIDLSASHSFPAMRKLYIQKANIFFLLYDNT-RDSFKEMVRLKDEIEEIHNVHLSELPIAVIKTKCDSTRSRTLPEMEVDDISH-WCGTLFACSAKKGVNIAEIEEYLL 224
            V V G   VGK+SL+       F     PTV D Y +    +  +   +  D + SH FPAM++L I K + F L+Y  T R S +E+  + ++I EI    +  +PI ++  KCD + SR +   E + ++  W       SAK   N+ E+ + LL
Sbjct:   10 VAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKG-DVESIPIMLVGNKCDESPSREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQELL 166
The following BLAST results are available for this feature:
BLAST of TCONS_00036971-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DIRA24.606e-1831.65GTP-binding protein Di-Ras2 OS=Homo sapiens GN=DIR... [more]
back to top