TCONS_00036725-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00036725-protein
Unique NameTCONS_00036725-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1065

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00036725-protein ID=TCONS_00036725-protein|Name=TCONS_00036725-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1065bp
MMLHFGFILVVICSICSYNVLGQNTISATICEHAKSAYTMTCSSSQYIVI
MEAMYGRQQRDVGGCAKVNPPSNGCKAVNSLTKARNHVTTTCGSKPSICT
IRATNSIFGDPCVGKPKYLQFSFRCVARERTEFLNQPTIKDEHANTLTLG
STITLSGCNYADNINKPEDLQAVWLKENKNISSVGIEPLGDQQFTLGPLR
INSATMTDEGDYRCGIMKNGILKATSSPIEILLEDVIRVKFTISVQALIP
QFYQRKRRDSIPTDNIIMENIQLELDKIVSKNDGNVETRFVRNLNLLDIY
ISKKKTHWGHEATQLFDQFKFLLRMTSIAGNRVTVKNKDFCEAETIGSST
FKGQYTFPTSPTDVKITKKCVHGTMNVNVQGFERICLENGKWSTGDLDHC
LAETKTTQELLNLEKNPICQTPKQKNCEQPVQKAQQLVSIVSSSQVITIP
EEVSLVSNIINELANNINKVATQNETTTILTDAMDVTSLIVDVEPDVIKV
ADKTTNALQNVRQGLEKIAKHSVTLLPIGSEVKISKPNIGFVGAKVKRTD
LTISAVDSGGSLISVVSADAGKPSPTAAKAVMNIPESVLDSNKKQVSLFS
FTYRTDTLFGNNQNKTTGSHILSATFDDQKFENLLTPINITFKVSSNAVN
VNPNCSFWDETKDIWSSKGLTTNSVEDDEKSILCQTTHLTNFALIIDVSQ
TRANPLALQVITWIGCGISLGGLILTVISYSAFRRLRRRLVPRLLLCLSI
SLIVTLLLFLMGVERSESETTCQVVAALIQYFLLVSFFWMAAQGINLYKK
MVRVLKKHISDSQYFLRSFIVCTVCPAIIVVVSASSKSEYYGDDNFCLVH
GLPFYIGLVLPICFIILLNIVLLILVLRAIHNTPSNVRASKSIDEETPYM
LKLAKITIACSVLLGVTWLFGFLAVGELTEVMQYLFCIFNSLQGFFIFVF
YTLTNEEVKKEWANLLGWETILSSFSQTTTKKSTLHLNARSKSHASTSSV
NANNNILNISSDSSSTGEPRYANTEELQENEYCTIQDVKREAAPYRSQAL
SSNAPRDIKNPIYYK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_021692XLOC_021692Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00036725TCONS_00036725Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000832GPCR_2_secretin-like
IPR000203GPS
IPR000922Lectin_gal-bd_dom
IPR013783Ig-like_fold
IPR017981GPCR_2-like
IPR007110Ig-like_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
GO:0030246carbohydrate binding
GO:0004888transmembrane signaling receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
GO:0007166cell surface receptor signaling pathway
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007166 cell surface receptor signaling pathway
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0004930 G-protein coupled receptor activity
molecular_function GO:0004888 transmembrane signaling receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000832GPCR, family 2, secretin-likePRINTSPR00249GPCRSECRETINcoord: 933..954
score: 30.59
coord: 710..734
score: 27.53
coord: 774..797
score: 30.72
coord: 903..923
score: 28.81
coord: 856..881
score: 23.47
IPR000832GPCR, family 2, secretin-likePFAMPF000027tm_2coord: 707..947
e-value: 9.3E-35
score: 120.0
IPR000203GPS motifSMARTSM00303GPS_3coord: 651..701
e-value: 4.6E-7
score: 39.5
IPR000203GPS motifPFAMPF01825GPScoord: 653..694
e-value: 6.1E-9
score: 36.3
IPR000203GPS motifPROSITEPS50221GPScoord: 652..701
score: 12.39
IPR000922D-galactoside/L-rhamnose binding SUEL lectin domainPFAMPF02140Gal_Lectincoord: 40..125
e-value: 3.0E-10
score: 40.3
IPR000922D-galactoside/L-rhamnose binding SUEL lectin domainPROSITEPS50228SUEL_LECTINcoord: 32..126
score: 10.063
NoneNo IPR availableGENE3D1.20.1070.10coord: 694..992
e-value: 1.2E-39
score: 135.5
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 702..976
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 129..237
e-value: 1.7E-6
score: 27.5
IPR017981GPCR, family 2-likePROSITEPS50261G_PROTEIN_RECEP_F2_4coord: 708..955
score: 27.658
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 137..230
score: 8.484

Blast
[Close]
BLAST of TCONS_00036725-protein vs. Swiss-Prot (Human)
Match: AGRL3 (Adhesion G protein-coupled receptor L3 OS=Homo sapiens GN=ADGRL3 PE=1 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 4.951e-52
Identity = 132/373 (35.39%), Postives = 201/373 (53.89%), Query Frame = 0 
Query:  612 NQNKTTGSHILSATFDDQKFEN---LLTPINITFK-VSSNAVNVNPNCSFWDETK----DIWSSKG---LTTNSVEDDEKSILCQTTHLTNFALI---IDVSQTRA-NPLALQVITWIGCGISLGGLILTVISYSAFRRLRR-RLVPRLLLCLSISLIVTLLLFLMGVERSESETTCQVVAALIQYFLLVSFFWMAAQGINLYKKMVRVLKKHISDSQYFLRSFIVCTVCPAIIVVVSASSKSEYYGDDNFCLVHGLPFYI-GLVLPICFIILLNIVLL-ILVLRAIHNTPSNVRASKSIDEETPYMLKLAKITIACSVLLGVTWLFGFLAVGELTEVMQYLFCIFNSLQGFFIFVFYTLTNEEVKKEWANLL 966
            N +    S +++A  + ++F N   L  P+  T K +  +  N NPNCSFW  +K      WS++G   LTTN          C   HLTNFA++   ++V  + A + L L VITW+G  +SL  L++ + ++  FR L+  R      LC  ISL V  LLFL+G+ R++    C V AAL+ +F L +F WM  +G+ LY  +V V +   S  +YF   ++V    PA+IV VSA+     YG D  C +    ++I   + P   II+LN++ L I + +  H+T      S  +D    +++    I + C  LLG+TW FG + + E T +M YLF IFNSLQG FIF+F+ +  ++V+KE+   L
Sbjct:  759 NHSVIVNSPVITAAIN-KEFSNKVYLADPVVFTVKHIKQSEENFNPNCSFWSYSKRTMTGYWSTQGCRLLTTNKTH-----TTCSCNHLTNFAVLMAHVEVKHSDAVHDLLLDVITWVGILLSLVCLLICIFTFCFFRGLQSDRNTIHKNLC--ISLFVAELLFLIGINRTDQPIACAVFAALLHFFFLAAFTWMFLEGVQLYIMLVEVFESEHSRRKYF---YLVGYGMPALIVAVSAAVDYRSYGTDKVCWLRLDTYFIWSFIGPATLIIMLNVIFLGIALYKMFHHTAILKPESGCLDNIKSWVI--GAIALLC--LLGLTWAFGLMYINESTVIMAYLFTIFNSLQGMFIFIFHCVLQKKVRKEYGKCL 1116
The following BLAST results are available for this feature:
BLAST of TCONS_00036725-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AGRL34.951e-5235.39Adhesion G protein-coupled receptor L3 OS=Homo sap... [more]
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