TCONS_00036636-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00036636-protein
Unique NameTCONS_00036636-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length535

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00036636-protein ID=TCONS_00036636-protein|Name=TCONS_00036636-protein|organism=Clytia hemisphaerica|type=polypeptide|length=535bp
MAAVDDTRTDLEIFFNDLISISNQLERNDARADGADRAEYLILVSLDLLR
TLCLIKNHIDMRIPVAGDVEAVGGNEEGQNNTGLQNDFNLLIENFQTLIQ
NYGRNFPFEIDDFDDVFVRQNDNDAGIVDADGVNHPVSRSVGRPKIHITQ
EQLEAFDDLNFTITKCAQLLGVSRHTILNRRDEYGMPSVRRTYTDIDDNQ
LDEVISEILRITPNSGERYTIGALRERGLHVQRNRIRQSILRLDPIGREC
RRRRTVFRRQYHVHGPNSLWHIDGHHKLIRWRFVIHGGIDGYSRCCVFLR
CSGNNKSTTVLEYFMRAVTNWGTPSRVRSDYGGENVLVADYMLRVRGLDR
GSFITGASVHNQRIERLWRDVRRVVVQQFSNLFYYMESIGILDPLQEADL
FSLHFVFIDRINRSCDELVGQLNHHPMRTANNQSPMQLFVTRCIELYGSQ
SSVTSELYNINQDEDREIPNPLIYGIENEPRINLNDDHGNIEVPEIQIQL
PDRLIETLSDIDVLANDGNFGINTYEHVKHLVSAL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_021623XLOC_021623Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00036636TCONS_00036636Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_dom
IPR011991WHTH_DNA-bd_dom
IPR001584Integrase_cat-core
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.60coord: 145..175
e-value: 0.0025
score: 17.1
IPR012337Ribonuclease H-like domainGENE3D3.30.420.10coord: 260..445
e-value: 9.2E-24
score: 83.7
IPR012337Ribonuclease H-like domainSUPERFAMILY53098Ribonuclease H-likecoord: 259..380
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 176..259
e-value: 9.9E-4
score: 18.6
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 262..443
score: 10.896

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036636-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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