TCONS_00036555-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00036555-protein
Unique NameTCONS_00036555-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length315

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00036555-protein ID=TCONS_00036555-protein|Name=TCONS_00036555-protein|organism=Clytia hemisphaerica|type=polypeptide|length=315bp
MNVKKLTTISLILFWFETQIIIIASRRFEIVGRNKIPKKTPYSTVDVKFE
QHCFSKCHHVIKCFSFLVQRTSNAMPIRCHFYNSTTTGLTDSQATEDNTI
LYTAQIQDCLDLYNSGHKSSGVYSINLLGKGQRDIRCDMEIEGGGWTVIL
YRTTSQYNWNVGWNQYKNGIVETTGDFYLGKELDSGQYELYFRTQIDVAN
SPANADNTYFGWHGNFHVANEADYYRLTVGDIKPGSQPQINDLNGMQFTT
TDMERDNYHHNCATFKLSAFWWNGCGRIQPFGVYLHSDSQKCMGINVSGV
GRLCTLNFQMLVRRK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_021564XLOC_021564Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00036555TCONS_00036555Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 104..315
e-value: 4.3E-14
score: 51.2
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 107..295
e-value: 1.4E-30
score: 106.6
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 100..287
score: 23.769
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 101..296
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 51..247
e-value: 1.1E-30
score: 106.5
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 248..298
e-value: 2.9E-11
score: 42.8

Blast
[Close]
BLAST of TCONS_00036555-protein vs. Swiss-Prot (Human)
Match: FGL1 (Fibrinogen-like protein 1 OS=Homo sapiens GN=FGL1 PE=1 SV=3)

HSP 1 Score: 94.7449 bits (234), Expect = 2.310e-22
Identity = 69/208 (33.17%), Postives = 106/208 (50.96%), Query Frame = 0 
Query:   96 EDNTIL---YTAQIQDCLDLYNSGHKSSGVYSIN-LLGKGQRDIRCDMEIEGGGWTVILYRTTSQYNWNVGWNQYKNG---IVETTGDFYLG-KELDSGQYELYFRTQIDVANSPANADNTYFGWHGNFHVANEADYYRL-------TVGDIKPGS-QPQIN---DLNGMQFTTTDMERDNYHHNCATFKLSAFWWNGCGRIQPFGVY 284
            ++NT++      Q  DC +++N G+K SG Y I  L    +  + CDM  +GGGWTVI  R+    N+N GW  Y+NG    V+  G+++LG K L     +  +  +ID+A+      N+ +  + NF V +E ++Y L       T GD   G+  P++        M+F+T D + DNY  NCA    S +W+N C      GVY
Sbjct:   67 DENTVIDLGSKRQYADCSEIFNDGYKLSGFYKIKPLQSPAEFSVYCDMS-DGGGWTVIQRRSDGSENFNRGWKDYENGFGNFVQKHGEYWLGNKNLHFLTTQEDYTLKIDLADFEK---NSRYAQYKNFKVGDEKNFYELNIGEYSGTAGDSLAGNFHPEVQWWASHQRMKFSTWDRDHDNYEGNCAEEDQSGWWFNRCHSANLNGVY 270
The following BLAST results are available for this feature:
BLAST of TCONS_00036555-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FGL12.310e-2233.17Fibrinogen-like protein 1 OS=Homo sapiens GN=FGL1 ... [more]
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