TCONS_00036454-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00036454-protein
Unique NameTCONS_00036454-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length256

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00036454-protein ID=TCONS_00036454-protein|Name=TCONS_00036454-protein|organism=Clytia hemisphaerica|type=polypeptide|length=256bp
MTLIADSYHTTSNFRITGVATDHAGVYTCLASNSLGNVSFATTVDVLYPP
TIIDFPPVEITATEYERNLKINCTATGNPQPDIDWYFNGTLYIVPGDGRV
VSDETKLSDSLTTYHSLLFTTVQLEDFGEWTCEAKNTLAGNIAAMDTNKT
LISIIYNLTFARPDHPQEYYYVNESTDVSLSCRVKSYPAATVTWSVATVD
VRYTFGDDVIENTAEYALVERAWNITNVNRTDAGNYQCFADSGLEQGNIS
TVLVVY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_021486XLOC_021486Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00036454TCONS_00036454Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003599Ig_sub
IPR003598Ig_sub2
IPR013783Ig-like_fold
IPR007110Ig-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 57..155
e-value: 0.088
score: 21.9
coord: 167..255
e-value: 2.0E-7
score: 40.7
IPR003598Immunoglobulin subtype 2SMARTSM00408igc2_5coord: 64..139
e-value: 0.034
score: 21.2
coord: 173..245
e-value: 5.4E-7
score: 39.2
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 159..229
e-value: 2.2E-9
score: 37.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 2..78
e-value: 1.5E-18
score: 66.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 79..145
e-value: 7.4E-11
score: 41.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 230..255
e-value: 0.015
score: 15.0
NoneNo IPR availablePFAMPF13927Ig_3coord: 49..136
e-value: 4.6E-13
score: 49.5
coord: 166..240
e-value: 3.5E-9
score: 37.1
NoneNo IPR availableCDDcd00096Igcoord: 69..136
e-value: 1.86835E-8
score: 48.6395
NoneNo IPR availableCDDcd00096Igcoord: 6..39
e-value: 1.57669E-4
score: 37.4687
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 163..250
score: 9.119
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 50..152
score: 11.969
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 4..52
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 163..255
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 48..138

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00036454-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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