TCONS_00036375-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00036375-protein
Unique NameTCONS_00036375-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length327

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00036375-protein ID=TCONS_00036375-protein|Name=TCONS_00036375-protein|organism=Clytia hemisphaerica|type=polypeptide|length=327bp
MMILSIMIPCILTLDFGFARGNPDPHTPFLPFKHLHTNTAINGPRPWFDG
EVPSKDHCFHKCLKQNFTNCEYVQYKEVSATTWLCKLYGIISDLSSYLVS
TEGEMLATAVHQNIDCADWMKLEYHQSGVYFIYYNREKFKVWCEMIPGKA
KIIIQKRFDGSVDFYQNWEKYKNGFGDIGGEHWLGLENIHKLTKGRNMEI
ALQANSFQDETQYAVYKNFYIEGEDLFYQLNAGVFVEGTPYHHDWTVSAD
GMKFSTFDSDQDLADLINCAVTYPSGWWNERCFNINFNGVYQHSETLTSR
ARGIIWQAWKGYKKGLKSTSMAIRRLD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_021419XLOC_021419Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00036375TCONS_00036375Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
IPR014715Fibrinogen_a/b/g_C_2
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSMARTSM00186FBG_2coord: 111..326
e-value: 6.8E-58
score: 208.3
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPFAMPF00147Fibrinogen_Ccoord: 115..324
e-value: 1.0E-53
score: 182.3
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainPROSITEPS51406FIBRINOGEN_C_2coord: 107..327
score: 43.007
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainCDDcd00087FReDcoord: 115..326
e-value: 7.04847E-75
score: 230.975
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 112..326
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 69..253
e-value: 2.9E-45
score: 154.1
IPR014715Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 2GENE3D4.10.530.10coord: 254..317
e-value: 1.6E-20
score: 72.5

Blast
[Close]
BLAST of TCONS_00036375-protein vs. Swiss-Prot (Human)
Match: MFAP4 (Microfibril-associated glycoprotein 4 OS=Homo sapiens GN=MFAP4 PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 2.504e-38
Identity = 88/224 (39.29%), Postives = 111/224 (49.55%), Query Frame = 0 
Query:  110 VHQNIDCADWMKLEYHQSGVYFIYYNREKFKV--WCEMIPGKAK-IIIQKRFDGSVDFYQNWEKYKNGFGDIGGEHWLGLENIHKLTKGRNMEIALQANSFQDETQYAVYKNFYI-----EGEDLFYQLNAGVFVEGTPYHHDWTVSADGMKFSTFDSDQDLADLINCAVTYPSGWWNERCFNINFNGVYQHSETLTSRARGIIWQAWKGYKKGLKSTSMAIRR 325
            + Q +DC D     Y   GVY IY +     V  +C+M     K  + QKRF+GSV F++ W  YK GFG   GE+WLGL+N+H LT  +  E+ +    F++ T YA Y +F I       E+  Y L    F +G     D      G KFSTFD DQDL  + NCA      +W   C   N NG Y     L S A GI W  WKG+   LK T M IRR
Sbjct:   35 LQQPLDCDDIYAQGYQSDGVYLIYPSGPSVPVPVFCDMTTEGGKWTVFQKRFNGSVSFFRGWNDYKLGFGRADGEYWLGLQNMHLLTLKQKYELRVDLEDFENNTAYAKYADFSISPNAVSAEEDGYTLFVAGFEDGGA--GDSLSYHSGQKFSTFDRDQDLF-VQNCAALSSGAFWFRSCHFANLNGFYLGGSHL-SYANGINWAQWKGFYYSLKRTEMKIRR 254
The following BLAST results are available for this feature:
BLAST of TCONS_00036375-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MFAP42.504e-3839.29Microfibril-associated glycoprotein 4 OS=Homo sapi... [more]
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