TCONS_00036192-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00036192-protein
Unique NameTCONS_00036192-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length413

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00036192-protein ID=TCONS_00036192-protein|Name=TCONS_00036192-protein|organism=Clytia hemisphaerica|type=polypeptide|length=413bp
MVEIAIIGSDMQEVIGTAIGFHLLSDGKIPIWGGVLITICDTFVFLFLDK
YGLRKLELFFATLITIMAVTFGYEYVVVAPDQGPLLKGMFVPYCKNCDSA
VVQQAVGVVGAIIMPHNFYLHSALVKSRKVDRKIKSAVKEANMYYFIESA
IALGISFIINVFVVSVFAQAFYKKTYGDVYDGCVAHHNPHAYIFNQTKTD
VIEGNLFYGGIFLGCQFGPAAMYIWAIGLLAAGQSSTMTGTYSGQFAMEG
FLKLSWPRWKRVLLTRSIAIAPTLALAFYEGINRLTGMNDYLNILQSLQL
PFAVIPLLTFTNDTNLMKDFTNGRILKTVTWLLAAIIIGVNMYFAALGLQ
GIENKILYLPATLVIIVWVSCYLMVAYFAGGFTFLNYFKCMQKPKAGYDQ
FEEEDKDESMVTQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_021286XLOC_021286Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00036192TCONS_00036192Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001046NRAMP_fam
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
cellular_component GO:0016020 membrane
molecular_function GO:0005215 transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001046NRAMP familyPRINTSPR00447NATRESASSCMPcoord: 233..252
score: 82.4
coord: 293..312
score: 67.0
coord: 53..74
score: 67.82
coord: 28..47
score: 68.6
coord: 105..128
score: 78.67
coord: 261..278
score: 63.56
IPR001046NRAMP familyPFAMPF01566Nrampcoord: 1..323
e-value: 4.4E-93
score: 312.0
IPR001046NRAMP familyTIGRFAMTIGR01197TIGR01197coord: 1..317
e-value: 3.0E-121
score: 403.3

Blast
[Close]
BLAST of TCONS_00036192-protein vs. Swiss-Prot (Human)
Match: NRAM2 (Natural resistance-associated macrophage protein 2 OS=Homo sapiens GN=SLC11A2 PE=1 SV=2)

HSP 1 Score: 454.136 bits (1167), Expect = 7.591e-157
Identity = 223/344 (64.83%), Postives = 270/344 (78.49%), Query Frame = 0 
Query:    1 MVEIAIIGSDMQEVIGTAIGFHLLSDGKIPIWGGVLITICDTFVFLFLDKYGLRKLELFFATLITIMAVTFGYEYVVVAPDQGPLLKGMFVPYCKNCDSAVVQQAVGVVGAIIMPHNFYLHSALVKSRKVDRKIKSAVKEANMYYFIESAIALGISFIINVFVVSVFAQAFYKKTYGDVYDGCVAHHNPHAYIFNQTKTDVIEGNLFYGGIFLGCQFGPAAMYIWAIGLLAAGQSSTMTGTYSGQFAMEGFLKLSWPRWKRVLLTRSIAIAPTLALAFYEGINRLTGMNDYLNILQSLQLPFAVIPLLTFTNDTNLMKDFTNGRILKTVTWLLAAIIIGVNMYF 344
            MVE+AIIGSDMQEVIG+AI  +LLS G+IP+WGGVLITI DTFVFLFLDKYGLRKLE FF  LITIMA+TFGYEYV V P Q  +LKGMFVP C  C +  ++QAVG+VGA+IMPHN YLHSALVKSR+V+R  K  V+EAN Y+FIES IAL +SFIINVFVVSVFA+AF+ KT   V + C    +PHA +F +  +  +  +++ GG+ LGC FGPAA+YIWA+G+LAAGQSSTMTGTYSGQF MEGFL L W R+ RV+LTRSIAI PTL +A ++ +  LTGMND+LN+LQSLQLPFA+IP+LTFT+   +M DF NG   +    +L  II  +NMYF
Sbjct:  152 MVELAIIGSDMQEVIGSAIAINLLSVGRIPLWGGVLITIADTFVFLFLDKYGLRKLEAFFGFLITIMALTFGYEYVTVKPSQSQVLKGMFVPSCSGCRTPQIEQAVGIVGAVIMPHNMYLHSALVKSRQVNRNNKQEVREANKYFFIESCIALFVSFIINVFVVSVFAEAFFGKTNEQVVEVCTNTSSPHAGLFPKDNS-TLAVDIYKGGVVLGCYFGPAALYIWAVGILAAGQSSTMTGTYSGQFVMEGFLNLKWSRFARVVLTRSIAIIPTLLVAVFQDVEHLTGMNDFLNVLQSLQLPFALIPILTFTSLRPVMSDFANGLGWRIAGGILVLIICSINMYF 494
The following BLAST results are available for this feature:
BLAST of TCONS_00036192-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NRAM27.591e-15764.83Natural resistance-associated macrophage protein 2... [more]
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