TCONS_00036188-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00036188-protein
Unique NameTCONS_00036188-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length909

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00036188-protein ID=TCONS_00036188-protein|Name=TCONS_00036188-protein|organism=Clytia hemisphaerica|type=polypeptide|length=909bp
SAGTNAGVMQHVGDAFSNTGNVGIDGSDISLLGIAPWGALSGRETLVNPN
IGKKHAPAVQYVITNKKRPGLDKNHTHFILVDDGTSGKFGTEINFRSDFE
ALVAKQNVQTSSSAGKVDVPVVILCLEGGPGTIKTMAAAVNNKTPLVVIG
GSGRAADVVSHAYDLLDSDDLGVSFIKPDYIDTVKENIRQSLKIQDNEDL
IEVLFKQLKDILKDITLVTVFMMEDDSSQSDLDLAVLQALLKANNISRKV
KDKIADFQKVKKSPTFATDLVYFAYETRRRMSSQEEAQHMIKEKVKECFA
DHDDFIETVYNKVMELLQNEAKVERFFQNGKVTYFESTILTHLLKDIYEV
EATKASFQMQLKLALAWNRIDVAKSEIFASNLQENKFESEWLYESMLAAV
VDNKFDFVDLFLREGLNLKSFLTLPRLLTLYREVNPNSPFGSFIAELCKW
KHLERDQNMGKIDMSNIAHVMEELMGDRFESRYTKQRQYTIGNFDPKKPL
PLPEPDLDLFTWAILCNRRELAKLLWTQCEDSIACALMASKLLKKLAERV
ADDKNVVDTIGDLIDHANTYEQLAVGVLDECRKENDERAQNIVISEQENF
GQLSNLDIAVTADNQEFVAHPSCQTLLSRFWMGSLYINTSYWRIVPCIFL
PFLIQPLITFHQDVDLASNKEDDEGLGDDEGYENNNYDETDDLNASMSLS
LQASRESFNAIRERADFIESELKETQFNEDTHSFREHFDDINNESGQAAL
KGPKTLSYFDRILFFYKAPFVKFITNLTSYLIFLLLYTFIICSRFEIKIH
PAEYVLHGWVITLIFEEFRQLLYQEPTNFIKKIEFYFTDPWNLVDFISLV
AFVVAAAFRYVAYFENNQNYLIVARVIFATDIALFFFRLLQIFLVNRKMG
PKIVMIREM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_021285XLOC_021285Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00036188TCONS_00036188Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.120.350coord: 217..897
e-value: 7.6E-5
score: 21.5
NoneNo IPR availableGENE3D3.40.50.450coord: 1..186
e-value: 9.9E-11
score: 41.0

Blast
BLAST of TCONS_00036188-protein vs. Swiss-Prot (Human)
Match: TRPM3 (Transient receptor potential cation channel subfamily M member 3 OS=Homo sapiens GN=TRPM3 PE=2 SV=4)

HSP 1 Score: 217.238 bits (552), Expect = 4.492e-58
Identity = 173/624 (27.72%), Postives = 292/624 (46.79%), Query Frame = 0
Query:  339 ILTHLLKDIYEVEATKASFQMQLKLALAWNRIDVAKSEIFASNLQENKFESEW----LYESMLAAVVDNKFDFVDLFLREGLNLKSFLTLPRLLTLY--REVNPNSPFGSFIAELCKWKHLERDQNMG------KIDMSNIAHVMEELMGDRFESRYTKQRQYTIGN--FDPKKP-----------LPL--------------------------PEPDLDLFTWAILCNRRELAKLLWTQCEDSIACALMASKLLKKLAERVADDKNVVDTIGDLIDH-ANTYEQLAVGVLDECRKENDERAQNIVISEQENFGQLSNLDIAVTADNQEFVAHPSCQTLLSRFWMGSLYI-NTSYWRIVPCIFLPFLIQPLITFHQDVDLASNKEDDEGLGDDEGYENNNYDETDDLNASMSLSLQASRESFNAIRERADFIESELKETQFNEDTHSFREHFDDINNESGQAALKGPKTLSYFDRILFFYKAPFVKFITNLTSYLIFLLLYTFIICSRFEIKIHPAEYVLHGWVITLIFEEFRQLLYQEPTNFIKKIEFYFTDPWNLVDFISLVAFVVAAAFRYVAYFENNQNYLIVARVIFATDIALFFFRLLQIFLVNRKMGPKIVMIREM 909
            ILT LLK         AS   QL LALAWNR+D+A+S+IF        +  +W    L ++ML A+V ++ DFV L +  G+++  FLT+ RL  LY  R    N+ +           HL RD   G      +I + +I  V+E LMG  +   YT++R  T+ +  F PK+P           +PL                          P P  +L  WA+L  R+++A   W   E+++A AL+A KL K +A   A + ++VD I   ++H +  + QLAV +LD+  K++++ A  ++  E +N+   + L +AV A +++F+AH   Q LL+  WMG L +   S  +++  I LP  I  L  F    D+    +  E    ++  E       +     M L+    R +  + R++    E E++                              + +    +I  FY AP VKF     +Y+ +L+L+ +I+  + E      E+++  ++ TL  E+ R++L  EP   ++K++ +  + WN+ D I+++ F V    R       +Q +    RVI+  +I  ++ RLL IF VN+ +GP ++MI +M
Sbjct:  467 ILTALLK------GANASAPDQLSLALAWNRVDIARSQIFI-------YGQQWPVGSLEQAMLDALVLDRVDFVKLLIENGVSMHRFLTISRLEELYNTRHGPSNTLY-----------HLVRDVKKGNLPPDYRISLIDIGLVIEYLMGGAYRCNYTRKRFRTLYHNLFGPKRPKALKLLGMEDDIPLRRGRKTTKKREEEVDIDLDDPEINHFPFPFHELMVWAVLMKRQKMALFFWQHGEEAMAKALVACKLCKAMAHE-ASENDMVDDISQELNHNSRDFGQLAVELLDQSYKQDEQLAMKLLTYELKNWSNATCLQLAVAAKHRDFIAHTCSQMLLTDMWMGRLRMRKNSGLKVILGILLPPSILSL-EFKNKDDMPYMSQAQEIHLQEKEAEEPEKPTKEKEEEDMELTAMLGRNNGESSRKKD---EEEVQSKH---------------------------RLIPLGRKIYEFYNAPIVKFWFYTLAYIGYLMLFNYIVLVKMERWPSTQEWIVISYIFTLGIEKMREILMSEPGKLLQKVKVWLQEYWNVTDLIAILLFSVGMILRL-----QDQPFRSDGRVIYCVNIIYWYIRLLDIFGVNKYLGPYVMMIGKM 1029          

HSP 2 Score: 116.316 bits (290), Expect = 2.697e-26
Identity = 81/273 (29.67%), Postives = 133/273 (48.72%), Query Frame = 0
Query:    1 SAGTNAGVMQHVGDAFSNTGNVGIDGSDISLLGIAPWGALSGRETLVNPNIGKKHAPAVQYVITN--KKRPGLDKNHTHFILVDDGTSGKFGTEINFRSDFEALVAKQNVQTSS---------------SAGKVD-------VPVVILCLEGGPGTIKTMAAAVNN--KTPLVVIGGSGRAADVVSHAYDLLDSDDLGVSFIKPDYIDTVKENIRQSLKIQDNEDLIEVLFKQLKDILKDITLVTVFMMEDDSSQSDLDLAVLQALLKANNIS 247
            + G N GV++HVGDA  +  +       I  +GIAPWG +  +E L+  ++ + +       ++N   K   L+  H+HFIL D+GT+GK+G E+  R   E  ++ Q + T                  + ++D       VPVV L +EGGP  I  +   + +    P+VV  GSGRA+D+++  +   +   L    ++   + T+++    + + Q        LF  L + +K   L+TVF M  +  Q D+DLA+L ALLK  N S
Sbjct:  220 TGGVNTGVIRHVGDALKD--HASKSRGKICTIGIAPWGIVENQEDLIGRDVVRPYQ-----TMSNPMSKLTVLNSMHSHFILADNGTTGKYGAEVKLRRQLEKHISLQKINTRCLPFFSLDSRLFYSFWGSCQLDSVGIGQGVPVVALIVEGGPNVISIVLEYLRDTPPVPVVVCDGSGRASDILAFGHKYSEEGGLINESLRDQLLVTIQKTFTYT-RTQAQH-----LFIILMECMKKKELITVFRMGSEGHQ-DIDLAILTALLKGANAS 478          
The following BLAST results are available for this feature:
BLAST of TCONS_00036188-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRPM34.492e-5827.72Transient receptor potential cation channel subfam... [more]
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