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Overview
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00036188-protein ID=TCONS_00036188-protein|Name=TCONS_00036188-protein|organism=Clytia hemisphaerica|type=polypeptide|length=909bpRun BLAST on NCBI Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
Blast
BLAST of TCONS_00036188-protein vs. Swiss-Prot (Human)
Match: TRPM3 (Transient receptor potential cation channel subfamily M member 3 OS=Homo sapiens GN=TRPM3 PE=2 SV=4) HSP 1 Score: 217.238 bits (552), Expect = 4.492e-58 Identity = 173/624 (27.72%), Postives = 292/624 (46.79%), Query Frame = 0
Query: 339 ILTHLLKDIYEVEATKASFQMQLKLALAWNRIDVAKSEIFASNLQENKFESEW----LYESMLAAVVDNKFDFVDLFLREGLNLKSFLTLPRLLTLY--REVNPNSPFGSFIAELCKWKHLERDQNMG------KIDMSNIAHVMEELMGDRFESRYTKQRQYTIGN--FDPKKP-----------LPL--------------------------PEPDLDLFTWAILCNRRELAKLLWTQCEDSIACALMASKLLKKLAERVADDKNVVDTIGDLIDH-ANTYEQLAVGVLDECRKENDERAQNIVISEQENFGQLSNLDIAVTADNQEFVAHPSCQTLLSRFWMGSLYI-NTSYWRIVPCIFLPFLIQPLITFHQDVDLASNKEDDEGLGDDEGYENNNYDETDDLNASMSLSLQASRESFNAIRERADFIESELKETQFNEDTHSFREHFDDINNESGQAALKGPKTLSYFDRILFFYKAPFVKFITNLTSYLIFLLLYTFIICSRFEIKIHPAEYVLHGWVITLIFEEFRQLLYQEPTNFIKKIEFYFTDPWNLVDFISLVAFVVAAAFRYVAYFENNQNYLIVARVIFATDIALFFFRLLQIFLVNRKMGPKIVMIREM 909
ILT LLK AS QL LALAWNR+D+A+S+IF + +W L ++ML A+V ++ DFV L + G+++ FLT+ RL LY R N+ + HL RD G +I + +I V+E LMG + YT++R T+ + F PK+P +PL P P +L WA+L R+++A W E+++A AL+A KL K +A A + ++VD I ++H + + QLAV +LD+ K++++ A ++ E +N+ + L +AV A +++F+AH Q LL+ WMG L + S +++ I LP I L F D+ + E ++ E + M L+ R + + R++ E E++ + + +I FY AP VKF +Y+ +L+L+ +I+ + E E+++ ++ TL E+ R++L EP ++K++ + + WN+ D I+++ F V R +Q + RVI+ +I ++ RLL IF VN+ +GP ++MI +M
Sbjct: 467 ILTALLK------GANASAPDQLSLALAWNRVDIARSQIFI-------YGQQWPVGSLEQAMLDALVLDRVDFVKLLIENGVSMHRFLTISRLEELYNTRHGPSNTLY-----------HLVRDVKKGNLPPDYRISLIDIGLVIEYLMGGAYRCNYTRKRFRTLYHNLFGPKRPKALKLLGMEDDIPLRRGRKTTKKREEEVDIDLDDPEINHFPFPFHELMVWAVLMKRQKMALFFWQHGEEAMAKALVACKLCKAMAHE-ASENDMVDDISQELNHNSRDFGQLAVELLDQSYKQDEQLAMKLLTYELKNWSNATCLQLAVAAKHRDFIAHTCSQMLLTDMWMGRLRMRKNSGLKVILGILLPPSILSL-EFKNKDDMPYMSQAQEIHLQEKEAEEPEKPTKEKEEEDMELTAMLGRNNGESSRKKD---EEEVQSKH---------------------------RLIPLGRKIYEFYNAPIVKFWFYTLAYIGYLMLFNYIVLVKMERWPSTQEWIVISYIFTLGIEKMREILMSEPGKLLQKVKVWLQEYWNVTDLIAILLFSVGMILRL-----QDQPFRSDGRVIYCVNIIYWYIRLLDIFGVNKYLGPYVMMIGKM 1029 HSP 2 Score: 116.316 bits (290), Expect = 2.697e-26 Identity = 81/273 (29.67%), Postives = 133/273 (48.72%), Query Frame = 0
Query: 1 SAGTNAGVMQHVGDAFSNTGNVGIDGSDISLLGIAPWGALSGRETLVNPNIGKKHAPAVQYVITN--KKRPGLDKNHTHFILVDDGTSGKFGTEINFRSDFEALVAKQNVQTSS---------------SAGKVD-------VPVVILCLEGGPGTIKTMAAAVNN--KTPLVVIGGSGRAADVVSHAYDLLDSDDLGVSFIKPDYIDTVKENIRQSLKIQDNEDLIEVLFKQLKDILKDITLVTVFMMEDDSSQSDLDLAVLQALLKANNIS 247
+ G N GV++HVGDA + + I +GIAPWG + +E L+ ++ + + ++N K L+ H+HFIL D+GT+GK+G E+ R E ++ Q + T + ++D VPVV L +EGGP I + + + P+VV GSGRA+D+++ + + L ++ + T+++ + + Q LF L + +K L+TVF M + Q D+DLA+L ALLK N S
Sbjct: 220 TGGVNTGVIRHVGDALKD--HASKSRGKICTIGIAPWGIVENQEDLIGRDVVRPYQ-----TMSNPMSKLTVLNSMHSHFILADNGTTGKYGAEVKLRRQLEKHISLQKINTRCLPFFSLDSRLFYSFWGSCQLDSVGIGQGVPVVALIVEGGPNVISIVLEYLRDTPPVPVVVCDGSGRASDILAFGHKYSEEGGLINESLRDQLLVTIQKTFTYT-RTQAQH-----LFIILMECMKKKELITVFRMGSEGHQ-DIDLAILTALLKGANAS 478 The following BLAST results are available for this feature:
BLAST of TCONS_00036188-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens)) Total hits: 1
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