TCONS_00035926-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00035926-protein
Unique NameTCONS_00035926-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length703

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00035926-protein ID=TCONS_00035926-protein|Name=TCONS_00035926-protein|organism=Clytia hemisphaerica|type=polypeptide|length=703bp
XSHFNEKYLRQQALYITQRGYIRETQTVANNNGNIANEINNEEIIAENDF
NVDPHLAVNDVPQEVDDQINNSIHQADEQHVININNNEVYQKLRESFTAN
YQLFNSIENERIIPTFIRRKPAKERINIVNDIANEFLTNIKENRGATFED
INCLIYTSAITLKGDTNNQTKAHTEPKWLTSLQNKIDSIRRNIAHIELIL
KCKETNTFTKKQQKISNRLRKKYGNIKKGNLVYRQKSLKNELKAISTKLK
YQRKVSERKRINKLFSHNPKSVYRSFKESASDVKDPPTKTEIENFWKGIW
ETEGNFNSDAEWLHTLENEYCTDIQNNTNCDITRETMRKSISKLQDSKSP
GNDLIIGYWYKHLTFFDNELSQLFNNALNGNIQVPDWMTKAKTTLLSKNK
ETKQPKNYRPIALQNIMLKLYTSCINQFVQHHCESNNIVTTEQAGGKKDV
WGCLEQLLINKTVMNETKHYRRSLVTMWLDYQKAFDSVPHQWLIKALQLA
KVPPVIISALEHLITKWSTNVHLRTTETTIVSDEIKYNRGIFQGDSLSVI
LFILCLNPLSFLLNKLVGYKMGPNGNRTQNITNLFFVDDLKLFATNLTQM
KTLLDIVTEFSNDIDMKFGLTKCAYLRIEKGKIATSKEPIVMNNISIDPV
KEGDSYKYLGQDENLGYVGPINKERVVKEYLKRVRKVWESELSGYHKHIA
HNA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_021094XLOC_021094Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00035926TCONS_00035926Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 179..199
NoneNo IPR availableGENE3D3.30.70.270coord: 387..640
e-value: 2.6E-19
score: 69.0
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 390..660
e-value: 3.65009E-48
score: 168.238
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 337..616
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 402..660
e-value: 1.1E-28
score: 100.1
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 377..647
score: 13.631

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035926-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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