TCONS_00035889-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00035889-protein
Unique NameTCONS_00035889-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length218

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00035889-protein ID=TCONS_00035889-protein|Name=TCONS_00035889-protein|organism=Clytia hemisphaerica|type=polypeptide|length=218bp
MPVKYPCNFCQRAVAKNHKGIQCDICDHWVHIKCNNTTNGEYLYLQNNND
VSWCCQKCTLSSIPFSTTSRDSIGLLNQGMRSLFIENFNPNSNPNVEFFR
DIKERLSEEFVEDDIDTDPSECPYSSISDLNKKYHSNKSTNFSVLHLNIN
SLKLHHSELDILLKNCNIKFDVIGISETGLNNTNNNKNTNLEGYHNPEDT
FSSRSKGGTRLNVSEDLN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_021077XLOC_021077Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00035889TCONS_00035889Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR019787Znf_PHD-finger
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 6..59
e-value: 4.9E-6
score: 36.1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 3..62
e-value: 6.2E-7
score: 28.6
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 7..59
e-value: 3.2E-7
score: 30.1
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 4..61
score: 9.134
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..218
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 7..58
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 5..66

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035889-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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