TCONS_00035824-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00035824-protein
Unique NameTCONS_00035824-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1533

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00035824-protein ID=TCONS_00035824-protein|Name=TCONS_00035824-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1533bp
MFVFFKMYSPSLTLVMHSQQHHSKRRFRKTLSSANTGIGTGQPLATIGEY
EKLQFGGPPSISPAINTRENFAFTFLRYCCRFLTMWTIFSTLICCFISLY
AYGNLADQDTKHPSLPQPFNVSENATTVVNPSVKLPPLQDEKKDPIVVEV
SDSQVPLDEDEENAPSPEDENHIIKPSIAPATPLLAPTPSSVIMHEYQPP
GPEASRSSLVEAAISSMVVHQQPHPVAEQPPSKLDVTSEVAKDASGPVSV
DKEEKQSGAPGFPSNEGVKDEQLVDLSLKIVEPIPTDSPLTPQSKEQTEE
VPPTPNPPPTQTTPTPITLGTEAVEQNGVDAVDLPKEADNLMKSLENEKE
NRETSDKPVVKERRDAEIESNVPVVKTQQNTKIEDDSLTKTVNEDKQSKE
PVTEHQPDKVTETDQMLSFTEWKQKLDREKEIKEKEDVVEIVVEGSETNE
TIVVPKPKRKKKLSDKNKKNYASPDCGAKVVSANSNAQHSSAILKEDKDA
YMLNPCNVQAWVVVELCERIQLDSIDFANFEMFSSSPETFTLHVSNRFPT
REWELVQEFETKASSSRQVQNFPIKDKFYAKYIKFEVLKYVGKEHYCPLS
LLRVYGITEVEEYEQEDRNDEDADSPPEEESPTETTQKSAEDQGLFASAK
NAVVGLVNNVAEKFSSGKSGENGTMPGVVPSDNRSKIVTLVANSDNMLEY
FEDVNFISTCIQRTLYSEYNTSVNPICGFGMTYVFMKQMCPTLKLYRSLK
SKKETSTRAIEKPKATSLNSGGPPPIPRPPLKKVVIVETDQNTKLEKELL
ETESNVKHAGSEETTVKDVVKVLPNQDDVTEKKELSEEKLPVVVSKSKVT
AHDVATTKSSISTCSKLKSEEHPIDVTNLVVPQPSFTEPSITIGQDNGKP
TAALKVLDKMTNVPPSPTHTDKQLVGEIKESSTTSISTTSSATVKEESVD
VLEFKVDNKTDVTTSMVAEKVENEISNTGDSKDTHNQEKVLDKATKDIEY
AESKSTSGDSQNKPTSTDETETPLKNSESEAAETSVHQPREEESTSVNQI
PITEKDKQVETNQDDHSNEKVKSESSKLETQKVMNIELQNPAKSESQNAV
KSETPTETKSDPQSDKATKPEVSSEKIQASKSTKALQSQSAVTNGNLAGS
KESIIVKLNAKIKGLQQNLTMSMMYLEEMSQKYRTAVAAVDKRHEKKSFA
LNVSLKAQQDLIQYQSKVIIDLTNKIEKLTSKLENITETMHKQHEMITEN
HVFWVFIEVVFITLFMIMCRTPNKTPSQHPIQQQSQVQQNDVKTTPSSRR
KSEPVVSHVNGANTGLGNQRHKKTKRSHSAAENLYANSTTTNTNASASIC
NHKQHQKSSLKFTTAASNYPDEIEPEASRRKRRKKLVHQFSTPNSGGSGD
TETPDSPKPVVKTRLSNTAGLLFYAGKGFLSGLTGAFYSRPSTTSKPSRR
ADALIDQPTVRSKQEQKATMKRAKSIDLPTVIEEVASINDLQMTPQDPAA
PPQNRPKSVDSVLQNVGKKHRNIKHAKAVGRFS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_021033XLOC_021033Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00035824TCONS_00035824Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008979Galactose-bd-like
IPR012919SUN_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1219..1246
NoneNo IPR availableCOILSCoilCoilcoord: 792..812
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 754..780
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..413
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1001..1141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 613..641
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1361..1411
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1274..1330
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..181
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1489..1533
IPR008979Galactose-binding domain-likeGENE3D2.60.120.260coord: 460..618
e-value: 3.1E-15
score: 55.8
IPR008979Galactose-binding domain-likeSUPERFAMILY49785Galactose-binding domain-likecoord: 506..604
IPR012919SUN domainPFAMPF07738Sad1_UNCcoord: 484..606
e-value: 2.8E-26
score: 92.0
IPR012919SUN domainPROSITEPS51469SUNcoord: 440..609
score: 33.116

Blast
[Close]
BLAST of TCONS_00035824-protein vs. Swiss-Prot (Human)
Match: SUCO (SUN domain-containing ossification factor OS=Homo sapiens GN=SUCO PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.105e-48
Identity = 102/261 (39.08%), Postives = 154/261 (59.00%), Query Frame = 0 
Query:  418 SFTEWKQKLDREKEIKEKEDVVEIVVEGSETNETIVVPKPKRKKKLSDKNKKNYASPDCGAKVVSANSNAQHSSAILKEDKDAYMLNPCNVQAWVVVELCERIQLDSIDFANFEMFSSSPETFTLHVSNRFPTREWELVQEFETKASSSRQVQNFPIKDKFYA-------KYIKFEVLKYVGKEHYCPLSLLRVYGITEVEEYEQ----------EDRNDEDADSPPEEESPTETTQKSAEDQGLFASAKNAVVGLVNNVA 661
            +F EWK+K            V+E+  E S++            KK+  KN+ NYAS +CGAK+++AN  A+ +SAIL E+ D YMLNPC+ + W V+ELCE IQ+  +D AN+E+FSS+P+ F + +S+R+PT +W  +  F  +    R VQ+FP+ ++ YA       KYIK E+L + G EH+CPLSL+RV+G + VEEYE+          ++  DED D P +  +  + + K+     L  SA NA++ +VN  A
Sbjct:  270 TFDEWKKK------------VMEVEKEKSQSMHASSNGGSHATKKVQ-KNRNNYASVECGAKILAANPEAKSTSAILIENMDLYMLNPCSTKIWFVIELCEPIQVKQLDIANYELFSSTPKDFLVSISDRYPTNKWIKLGTFHGR--DERNVQSFPLDEQMYAKYVKMFIKYIKVELLSHFGSEHFCPLSLIRVFGTSMVEEYEEIADSQYHSERQELFDEDYDYPLDYNTGEDKSSKN-----LLGSATNAILNMVNIAA 510
The following BLAST results are available for this feature:
BLAST of TCONS_00035824-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SUCO1.105e-4839.08SUN domain-containing ossification factor OS=Homo ... [more]
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