TCONS_00035821-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00035821-protein
Unique NameTCONS_00035821-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length329

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00035821-protein ID=TCONS_00035821-protein|Name=TCONS_00035821-protein|organism=Clytia hemisphaerica|type=polypeptide|length=329bp
MRRSSFLILMFFSLWTVTDGAMPCIGKNGKPVDMYVLYKLPKIYWQDVPE
YVKDGSAYAYLDNEDMEFTLSPTLITSPQSVAGLTLNQVYDAYENRATPS
GQAHLFYNDANLDINDDSYNSKWGHTKGAMAFDQQIGFWMIHSVPHFPDF
AKNGYSYPSSGHKYGQMFFCMTLNSSAINDVGLQLRYNNPYVQDSFMPEE
WNDKFPNIAALLKGEIIDSDPYYHIQDFISLGGMKLKSFAKGTKFNKDLY
STLVAPTLKINLLTETWQNGQGNLGSACNTSYTVEDVTNIKLDVPDGSYY
AFRDTNDHSKYALSDTADNPYVCIGDINR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_021030XLOC_021030Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00035821TCONS_00035821Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004947DNase_II
Vocabulary: Molecular Function
TermDefinition
GO:0004531deoxyribonuclease II activity
Vocabulary: Biological Process
TermDefinition
GO:0006259DNA metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006259 DNA metabolic process
molecular_function GO:0004531 deoxyribonuclease II activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004947Deoxyribonuclease IIPFAMPF03265DNase_IIcoord: 24..329
e-value: 3.0E-85
score: 286.2
NoneNo IPR availableCDDcd09120PLDc_DNaseII_1coord: 24..173
e-value: 1.80608E-44
score: 149.752

Blast
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BLAST of TCONS_00035821-protein vs. Swiss-Prot (Human)
Match: DNS2A (Deoxyribonuclease-2-alpha OS=Homo sapiens GN=DNASE2 PE=1 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 1.731e-56
Identity = 111/325 (34.15%), Postives = 165/325 (50.77%), Query Frame = 0 
Query:    6 FLILMFFSLWTVTDGAMPCIGKNGKPVDMYVLYKLPKIYWQDVPEYVKDGSAYAYLDNEDMEFTLSPTLITSPQSVAGLTLNQVYDAYENRATPSGQAHLFYNDANLDINDDSYNSKWGHTKGAMAFDQQIGFWMIHSVPHFPDFAKNG-YSYPSSGHKYGQMFFCMTLNSSAINDVGLQLRYNNPYVQDSFMPEEWNDKFPNIAALLKGEIIDSDPYYHIQDFISLGGMKLKSFAKGTKFNKDLYSTLVAPTLKINLLTETWQNGQGNLGSACNTSYTVEDVTNIKLDVPDGSYYAFRDTNDHSKYALSDTADNPYVCIGDINR 329
             + L+  +L  V  GA+ C G +G+PVD +V+YKLP +  +   E  + G  Y YLD     +     LI SP+   G +L  +Y     R+  S  A L YND     +    +S  GHTKG +  D   GFW++HSVP+FP  A +  YS+P S   YGQ   C++   +  + +G QL Y  P+V +  +   +  +FP++  ++KG  +  +P+       S  G   +SFAK +KF  DLYS  +A  L  NL  + W    G L S C+  + V +V  I    P G   +F  T DHSK+ +S     P+ C+GD+NR
Sbjct:    1 MIPLLLAALLCVPAGALTCYGDSGQPVDWFVVYKLPAL--RGSGEAAQRGLQYKYLDESSGGWRDGRALINSPEGAVGRSLQPLY-----RSNTSQLAFLLYNDQPPQPSKAQDSSMRGHTKGVLLLDHDGGFWLVHSVPNFPPPASSAAYSWPHSACTYGQTLLCVSFPFAQFSKMGKQLTYTYPWVYNYQLEGIFAQEFPDLENVVKGHHVSQEPWNSSITLTSQAGAVFQSFAKFSKFGDDLYSGWLAAALGTNLQVQFWHKTVGILPSNCSDIWQVLNVNQIAFPGPAGP--SFNSTEDHSKWCVSP--KGPWTCVGDMNR 314
The following BLAST results are available for this feature:
BLAST of TCONS_00035821-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DNS2A1.731e-5634.15Deoxyribonuclease-2-alpha OS=Homo sapiens GN=DNASE... [more]
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