TCONS_00035811-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00035811-protein
Unique NameTCONS_00035811-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length271

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00035811-protein ID=TCONS_00035811-protein|Name=TCONS_00035811-protein|organism=Clytia hemisphaerica|type=polypeptide|length=271bp
RSMYKNKLSPVVSEEERIQHERAMKCYICDKPFITNTEHPDYLNKKKVLD
HCHITSKFRGSAHSICNLQLSIDHEKIKIPIFIHNLKGYDSHLILSSAKK
RHDEITVIPTNMETYISFSIGNVEFFDSCQFMPSKLDKLAKNLQKSSPNQ
RENFPEITRYLAHQLGNHETQDPPQQQRLYDNDFMDVNDSMDELMMDIEL
EDAGYIPNDSMDEMMLGFNDDAVEEVDEFGLNGDDLGDLLDAVGDYRNNP
YVEPTLNAEQEEEVYSLKVLR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_021020XLOC_021020Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00035811TCONS_00035811Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004868DNA-dir_DNA_pol_B_mt/vir
IPR012337RNaseH-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:00084083'-5' exonuclease activity
GO:0003887DNA-directed DNA polymerase activity
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006260 DNA replication
molecular_function GO:0008408 3'-5' exonuclease activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0003887 DNA-directed DNA polymerase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004868DNA-directed DNA polymerase, family B, mitochondria/virusPFAMPF03175DNA_pol_B_2coord: 80..180
e-value: 8.4E-6
score: 24.8
IPR012337Ribonuclease H-like domainGENE3D3.30.420.10coord: 4..261
e-value: 3.7E-27
score: 95.0
NoneNo IPR availableSUPERFAMILY54060His-Me finger endonucleasescoord: 14..96

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035811-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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